Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.HCD 3-hydroxyacyl-CoA dehydratase

Gene families : OG0003667 (Archaeplastida) Phylogenetic Tree(s): OG0003667_tree ,
OG_05_0003859 (LandPlants) Phylogenetic Tree(s): OG_05_0003859_tree ,
OG_06_0003683 (SeedPlants) Phylogenetic Tree(s): OG_06_0003683_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: GSVIVT01005931001
Cluster HCCA: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
AT5G10480 PEP, PAS2 Protein-tyrosine phosphatase-like, PTPLA 0.11 Archaeplastida
Cpa|evm.model.tig00020909.12 No alias Lipid metabolism.fatty acid synthesis.fatty acid... 0.03 Archaeplastida
Cre03.g167924 No alias Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... 0.03 Archaeplastida
Gb_04514 No alias 3-hydroxyacyl-CoA dehydratase (HCD) 0.05 Archaeplastida
LOC_Os01g05694.1 No alias 3-hydroxyacyl-CoA dehydratase (HCD) 0.03 Archaeplastida
MA_125121g0010 No alias Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... 0.04 Archaeplastida
MA_57869g0010 No alias Very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase... 0.06 Archaeplastida
Zm00001e016910_P001 No alias 3-hydroxyacyl-CoA dehydratase (HCD) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR007482 Tyr_Pase-like_PTPLA 54 215
No external refs found!