GSVIVT01005975001

Description : Lipid metabolism.fatty acid synthesis.fatty acid desaturation and elongation.fatty acid elongation.fatty acid elongation complex.KCS 3-ketoacyl-CoA synthase

Gene families : OG0000123 (Archaeplastida) Phylogenetic Tree(s): OG0000123_tree ,
OG_05_0004454 (LandPlants) Phylogenetic Tree(s): OG_05_0004454_tree ,
OG_06_0002864 (SeedPlants) Phylogenetic Tree(s): OG_06_0002864_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01005975001
Cluster	HCCA: Cluster_76

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00268740	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
AMTR_s00014p00234760	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
AMTR_s00034p00045070	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	Archaeplastida
AMTR_s00069p00182480	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
AMTR_s00078p00154520	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.06	Archaeplastida
AMTR_s00079p00192440	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
AMTR_s00129p00101620	evm_27.TU.AmTr_v1...	3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana	0.04	Archaeplastida
AMTR_s00129p00102500	evm_27.TU.AmTr_v1...	3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana	0.02	Archaeplastida
AMTR_s00178p00018030	evm_27.TU.AmTr_v1...	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	Archaeplastida
AT1G01120	KCS1	3-ketoacyl-CoA synthase 1	0.02	Archaeplastida
AT1G04220	KCS2	3-ketoacyl-CoA synthase 2	0.04	Archaeplastida
AT1G25450	KCS5, CER60	3-ketoacyl-CoA synthase 5	0.05	Archaeplastida
AT1G68530	G2, POP1, KCS6,...	3-ketoacyl-CoA synthase 6	0.03	Archaeplastida
AT1G71160	KCS7	3-ketoacyl-CoA synthase 7	0.03	Archaeplastida
AT2G26250	KCS10, FDH	3-ketoacyl-CoA synthase 10	0.04	Archaeplastida
AT2G46720	HIC, KCS13	3-ketoacyl-CoA synthase 13	0.04	Archaeplastida
AT3G52160	KCS15	3-ketoacyl-CoA synthase 15	0.04	Archaeplastida
AT5G43760	KCS20	3-ketoacyl-CoA synthase 20	0.04	Archaeplastida
AT5G49070	KCS21	3-ketoacyl-CoA synthase 21	0.05	Archaeplastida
GSVIVT01018538001	No alias	3-ketoacyl-CoA synthase 5 OS=Arabidopsis thaliana	0.02	Archaeplastida
GSVIVT01018539001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.06	Archaeplastida
GSVIVT01022919001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
GSVIVT01025052001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.05	Archaeplastida
GSVIVT01034244001	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.04	Archaeplastida
Gb_06884	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Gb_06885	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Gb_08308	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Gb_15649	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Gb_15941	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Gb_17018	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Gb_20097	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Gb_27863	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
Gb_27864	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Gb_32625	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os02g11070.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
LOC_Os02g49920.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os02g56860.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os03g06705.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os03g08360.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os03g12030.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os03g26530.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
LOC_Os06g14810.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
LOC_Os06g15170.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
LOC_Os06g39750.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os09g19650.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
LOC_Os10g28060.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os10g33370.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
LOC_Os11g37900.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_10429708g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
MA_10433600g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
MA_11217g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_309409g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida
MA_339700g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_415118g0020	No alias	3-ketoacyl-CoA synthase 11 OS=Arabidopsis thaliana...	0.03	Archaeplastida
MA_43136g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
MA_759169g0010	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Mp1g06080.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Mp2g20220.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Mp2g20240.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.01	Archaeplastida
Pp3c1_26250V3.1	No alias	3-ketoacyl-CoA synthase 11	0.04	Archaeplastida
Pp3c2_16180V3.1	No alias	3-ketoacyl-CoA synthase 11	0.02	Archaeplastida
Pp3c8_1690V3.1	No alias	3-ketoacyl-CoA synthase 11	0.03	Archaeplastida
Pp3c8_6790V3.1	No alias	3-ketoacyl-CoA synthase 4	0.04	Archaeplastida
Smo437285	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.03	Archaeplastida
Smo79947	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.09	Archaeplastida
Smo91671	No alias	Lipid metabolism.fatty acid synthesis.fatty acid...	0.02	Archaeplastida
Solyc02g063140.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Solyc05g009270.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc05g009280.4.1	No alias	no hits & (original description: none)	0.04	Archaeplastida
Solyc05g013220.2.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc06g053870.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
Solyc06g065560.2.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc08g067260.4.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Solyc09g083050.3.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.06	Archaeplastida
Solyc11g072990.1.1	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e000476_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e000593_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e000868_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e001021_P002	No alias	no hits & (original description: none)	0.03	Archaeplastida
Zm00001e001847_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Zm00001e002667_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e004603_P002	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Zm00001e004773_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e012803_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.05	Archaeplastida
Zm00001e016197_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e021255_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Zm00001e033922_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.04	Archaeplastida
Zm00001e034732_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.03	Archaeplastida
Zm00001e038586_P001	No alias	3-ketoacyl-CoA synthase (KCS)	0.02	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006631	fatty acid metabolic process	None	Extended
BP	GO:0006633	fatty acid biosynthetic process	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016053	organic acid biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	transferase activity, transferring acyl groups	None	Extended
MF	GO:0016747	transferase activity, transferring acyl groups other than amino-acyl groups	IEA	Interproscan
BP	GO:0019752	carboxylic acid metabolic process	None	Extended
BP	GO:0032787	monocarboxylic acid metabolic process	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
BP	GO:0044283	small molecule biosynthetic process	None	Extended
BP	GO:0046394	carboxylic acid biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0072330	monocarboxylic acid biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	Neighborhood
MF	GO:0004601	peroxidase activity	IEP	Neighborhood
MF	GO:0004650	polygalacturonase activity	IEP	Neighborhood
MF	GO:0005215	transporter activity	IEP	Neighborhood
MF	GO:0005337	nucleoside transmembrane transporter activity	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006812	cation transport	IEP	Neighborhood
BP	GO:0006813	potassium ion transport	IEP	Neighborhood
BP	GO:0006950	response to stress	IEP	Neighborhood
BP	GO:0006979	response to oxidative stress	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
MF	GO:0008238	exopeptidase activity	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0008519	ammonium transmembrane transporter activity	IEP	Neighborhood
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
BP	GO:0015672	monovalent inorganic cation transport	IEP	Neighborhood
BP	GO:0015696	ammonium transport	IEP	Neighborhood
BP	GO:0015858	nucleoside transport	IEP	Neighborhood
MF	GO:0015932	nucleobase-containing compound transmembrane transporter activity	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016491	oxidoreductase activity	IEP	Neighborhood
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Neighborhood
MF	GO:0016787	hydrolase activity	IEP	Neighborhood
MF	GO:0016872	intramolecular lyase activity	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0020037	heme binding	IEP	Neighborhood
MF	GO:0022857	transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood
BP	GO:0030001	metal ion transport	IEP	Neighborhood
MF	GO:0030599	pectinesterase activity	IEP	Neighborhood
BP	GO:0034220	ion transmembrane transport	IEP	Neighborhood
BP	GO:0042545	cell wall modification	IEP	Neighborhood
BP	GO:0045229	external encapsulating structure organization	IEP	Neighborhood
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0046906	tetrapyrrole binding	IEP	Neighborhood
MF	GO:0046983	protein dimerization activity	IEP	Neighborhood
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Neighborhood
MF	GO:0048037	cofactor binding	IEP	Neighborhood
MF	GO:0050660	flavin adenine dinucleotide binding	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
MF	GO:0052689	carboxylic ester hydrolase activity	IEP	Neighborhood
BP	GO:0055085	transmembrane transport	IEP	Neighborhood
BP	GO:0055114	oxidation-reduction process	IEP	Neighborhood
MF	GO:0070008	serine-type exopeptidase activity	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
BP	GO:0071554	cell wall organization or biogenesis	IEP	Neighborhood
BP	GO:0071555	cell wall organization	IEP	Neighborhood
BP	GO:0071804	cellular potassium ion transport	IEP	Neighborhood
BP	GO:0071805	potassium ion transmembrane transport	IEP	Neighborhood
BP	GO:0098655	cation transmembrane transport	IEP	Neighborhood
BP	GO:0098660	inorganic ion transmembrane transport	IEP	Neighborhood
BP	GO:0098662	inorganic cation transmembrane transport	IEP	Neighborhood
BP	GO:1901264	carbohydrate derivative transport	IEP	Neighborhood
MF	GO:1901505	carbohydrate derivative transmembrane transporter activity	IEP	Neighborhood
BP	GO:1901642	nucleoside transmembrane transport	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR013601	FAE1_typ3_polyketide_synth	54	231

External Links

No external refs found!

GSVIVT01005975001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation