1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01006148001

GSVIVT01006148001


Description : Secondary metabolism.phenolics.p-coumaroyl-CoA synthesis.phenylalanine ammonia lyase (PAL)


Gene families : OG0000239 (Archaeplastida) Phylogenetic Tree(s): OG0000239_tree ,
OG_05_0000119 (LandPlants) Phylogenetic Tree(s): OG_05_0000119_tree ,
OG_06_0016402 (SeedPlants) Phylogenetic Tree(s): OG_06_0016402_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01006148001
Cluster HCCA: Cluster_165

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00024p00201680 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 Archaeplastida
AMTR_s00024p00201930 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.02 Archaeplastida
AMTR_s00032p00159210 evm_27.TU.AmTr_v1... Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01024292001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
GSVIVT01024293001 No alias Enzyme classification.EC_4 lyases.EC_4.3 carbon-nitrogen... 0.03 Archaeplastida
GSVIVT01024295001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 Archaeplastida
GSVIVT01024299001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 Archaeplastida
GSVIVT01024305001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
GSVIVT01024306001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.05 Archaeplastida
GSVIVT01024315001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.06 Archaeplastida
GSVIVT01025703001 No alias Secondary metabolism.phenolics.p-coumaroyl-CoA... 0.04 Archaeplastida
Gb_01672 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Gb_16672 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Gb_21115 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Gb_31408 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Gb_41796 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
LOC_Os02g41650.3 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
LOC_Os02g41670.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
LOC_Os02g41680.1 No alias phenylalanine ammonia lyase (PAL) 0.06 Archaeplastida
LOC_Os04g43800.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
LOC_Os05g35290.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
LOC_Os11g48110.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
MA_44561g0010 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
MA_73113g0010 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Mp1g05190.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp1g05220.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Mp1g10150.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Mp4g10060.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Mp4g14110.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Mp4g14140.1 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Mp4g14160.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp4g14170.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp4g14210.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Mp7g14880.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Pp3c10_21810V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c13_9000V3.1 No alias phenylalanine ammonia-lyase 4 0.04 Archaeplastida
Pp3c14_11870V3.1 No alias PHE ammonia lyase 1 0.07 Archaeplastida
Pp3c19_13690V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c1_18680V3.1 No alias phenyl alanine ammonia-lyase 3 0.03 Archaeplastida
Pp3c1_18830V3.1 No alias PHE ammonia lyase 1 0.04 Archaeplastida
Pp3c1_18940V3.1 No alias PHE ammonia lyase 1 0.03 Archaeplastida
Pp3c21_7640V3.1 No alias phenylalanine ammonia-lyase 2 0.03 Archaeplastida
Pp3c21_7680V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c24_13110V3.1 No alias phenylalanine ammonia-lyase 4 0.04 Archaeplastida
Pp3c2_30610V3.1 No alias phenylalanine ammonia-lyase 4 0.02 Archaeplastida
Pp3c2_32330V3.1 No alias phenylalanine ammonia-lyase 4 0.03 Archaeplastida
Pp3c2_32410V3.1 No alias phenylalanine ammonia-lyase 4 0.02 Archaeplastida
Solyc05g056170.3.1 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Solyc09g007910.4.1 No alias phenylalanine ammonia lyase (PAL) 0.02 Archaeplastida
Solyc10g011925.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e005064_P001 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Zm00001e023031_P002 No alias phenylalanine ammonia lyase (PAL) 0.04 Archaeplastida
Zm00001e023032_P002 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida
Zm00001e023033_P001 No alias phenylalanine ammonia lyase (PAL) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0005507 copper ion binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0048038 quinone binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001106 Aromatic_Lyase 1 184
No external refs found!