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  5. GSVIVT01007065001

GSVIVT01007065001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.G2-like GARP transcription factor


Gene families : OG0000027 (Archaeplastida) Phylogenetic Tree(s): OG0000027_tree ,
OG_05_0000069 (LandPlants) Phylogenetic Tree(s): OG_05_0000069_tree ,
OG_06_0000042 (SeedPlants) Phylogenetic Tree(s): OG_06_0000042_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007065001
Cluster HCCA: Cluster_154

Target Alias Description ECC score Gene Family Method Actions
AT1G69580 No alias Homeodomain-like superfamily protein 0.03 Archaeplastida
AT2G38300 No alias myb-like HTH transcriptional regulator family protein 0.03 Archaeplastida
Gb_09291 No alias Protein PHR1-LIKE 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os08g25799.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os09g12750.1 No alias G2-like GARP transcription factor 0.02 Archaeplastida
LOC_Os09g12770.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
MA_259372g0010 No alias G2-like GARP transcription factor 0.03 Archaeplastida
MA_9897324g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c23_19680V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Pp3c4_23130V3.1 No alias myb-like HTH transcriptional regulator family protein 0.02 Archaeplastida
Pp3c8_16910V3.1 No alias Homeodomain-like superfamily protein 0.02 Archaeplastida
Solyc09g072830.4.1 No alias PHR1 transcription factor involved in proline synthesis... 0.03 Archaeplastida
Solyc11g022470.2.1 No alias G2-like GARP transcription factor 0.04 Archaeplastida
Zm00001e009653_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e013758_P003 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e030689_P002 No alias G2-like GARP transcription factor 0.02 Archaeplastida
Zm00001e035893_P001 No alias G2-like GARP transcription factor 0.03 Archaeplastida
Zm00001e039024_P001 No alias G2-like GARP transcription factor 0.01 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003713 transcription coactivator activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0042578 phosphoric ester hydrolase activity IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
InterPro domains Description Start Stop
IPR025756 Myb_CC_LHEQLE 105 151
IPR001005 SANT/Myb 22 72
No external refs found!