GSVIVT01007188001


Description : RNA biosynthesis.transcriptional activation.TIFY transcription factor


Gene families : OG0006824 (Archaeplastida) Phylogenetic Tree(s): OG0006824_tree ,
OG_05_0005135 (LandPlants) Phylogenetic Tree(s): OG_05_0005135_tree ,
OG_06_0005073 (SeedPlants) Phylogenetic Tree(s): OG_06_0005073_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007188001
Cluster HCCA: Cluster_109

Target Alias Description ECC score Gene Family Method Actions
AT1G30135 JAZ8, TIFY5A jasmonate-zim-domain protein 8 0.04 Archaeplastida
AT3G22275 No alias unknown protein; FUNCTIONS IN: molecular_function... 0.03 Archaeplastida
Solyc08g036620.4.1 No alias transcription factor (TIFY) 0.03 Archaeplastida
Solyc08g036640.3.1 No alias transcription factor (TIFY) 0.04 Archaeplastida
Solyc08g036660.4.1 No alias transcription factor (TIFY) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004568 chitinase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
BP GO:0006022 aminoglycan metabolic process IEP Neighborhood
BP GO:0006026 aminoglycan catabolic process IEP Neighborhood
BP GO:0006030 chitin metabolic process IEP Neighborhood
BP GO:0006032 chitin catabolic process IEP Neighborhood
BP GO:0006040 amino sugar metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0042737 drug catabolic process IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0046348 amino sugar catabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901071 glucosamine-containing compound metabolic process IEP Neighborhood
BP GO:1901072 glucosamine-containing compound catabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR018467 CCT_CS 76 96
IPR010399 Tify_dom 11 43
No external refs found!