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  5. GSVIVT01007580001

GSVIVT01007580001


Description : Protein STICHEL-like 2 OS=Arabidopsis thaliana


Gene families : OG0000633 (Archaeplastida) Phylogenetic Tree(s): OG0000633_tree ,
OG_05_0000427 (LandPlants) Phylogenetic Tree(s): OG_05_0000427_tree ,
OG_06_0001603 (SeedPlants) Phylogenetic Tree(s): OG_06_0001603_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007580001
Cluster HCCA: Cluster_50

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023130001 No alias Protein STICHEL OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_40210 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_40211 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g53070.1 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os05g45340.1 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os08g02670.1 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os11g13990.1 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g10670.1 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os12g19180.1 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.07 Archaeplastida
MA_64150g0010 No alias Protein STICHEL-like 4 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Mp1g13040.1 No alias Protein STICHEL-like 3 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e007784_P001 No alias Protein STICHEL-like 2 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Zm00001e039775_P001 No alias Protein STICHEL OS=Arabidopsis thaliana... 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000796 condensin complex IEP Neighborhood
MF GO:0003950 NAD+ ADP-ribosyltransferase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006323 DNA packaging IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006471 protein ADP-ribosylation IEP Neighborhood
BP GO:0007076 mitotic chromosome condensation IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0030261 chromosome condensation IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 387 505
No external refs found!