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  5. GSVIVT01007647001

GSVIVT01007647001


Description : Vesicle trafficking.autophagosome formation.cargo recruitment.NBR1 autophagic adapter protein


Gene families : OG0002260 (Archaeplastida) Phylogenetic Tree(s): OG0002260_tree ,
OG_05_0002463 (LandPlants) Phylogenetic Tree(s): OG_05_0002463_tree ,
OG_06_0002833 (SeedPlants) Phylogenetic Tree(s): OG_06_0002833_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007647001
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00211440 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.cargo... 0.03 Archaeplastida
LOC_Os02g38050.1 No alias NBR1 autophagosome autophagic adapter protein 0.05 Archaeplastida
LOC_Os04g40090.1 No alias NBR1 autophagosome autophagic adapter protein 0.03 Archaeplastida
Zm00001e014993_P002 No alias NBR1 autophagosome autophagic adapter protein 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000159 protein phosphatase type 2A complex IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
CC GO:0008287 protein serine/threonine phosphatase complex IEP Neighborhood
MF GO:0019208 phosphatase regulator activity IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019888 protein phosphatase regulator activity IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
CC GO:1903293 phosphatase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000270 PB1_dom 6 85
IPR000433 Znf_ZZ 418 453
IPR032350 N_BRCA1_central 516 615
No external refs found!