- Species
- Tools
- Expression Profiles
- Compare profiles
- Create heatmap
- Export expression levels
- Expression Specificity
- Compare specificities
- Find specific profiles
- Co-expression Networks
- Create custom network
- Find enriched clusters
- Search
Description : Protein biosynthesis.cytosolic ribosome.large subunit (LSU).LSU proteome component.RPL27a component
Gene families : OG0002282 (Archaeplastida) Phylogenetic Tree(s): OG0002282_tree ,
OG_05_0002030 (LandPlants) Phylogenetic Tree(s): OG_05_0002030_tree ,
OG_06_0002836 (SeedPlants) Phylogenetic Tree(s): OG_06_0002836_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01007667001 | |
| Cluster | HCCA: Cluster_132 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00069p00158350 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | Archaeplastida | |
| AMTR_s00130p00058120 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.04 | Archaeplastida | |
| AT1G23290 | RPL27AB, RPL27A | Ribosomal protein L18e/L15 superfamily protein | 0.09 | Archaeplastida | |
| AT1G70600 | No alias | Ribosomal protein L18e/L15 superfamily protein | 0.09 | Archaeplastida | |
| Cre02.g115200 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.07 | Archaeplastida | |
| Gb_05659 | No alias | component RPL27a of LSU proteome component | 0.09 | Archaeplastida | |
| LOC_Os02g07890.2 | No alias | component RPL27a of LSU proteome component | 0.03 | Archaeplastida | |
| LOC_Os03g29460.1 | No alias | component RPL27a of LSU proteome component | 0.04 | Archaeplastida | |
| LOC_Os07g42170.1 | No alias | component RPL27a of LSU proteome component | 0.09 | Archaeplastida | |
| MA_10436259g0020 | No alias | component RPL27a of LSU proteome component | 0.11 | Archaeplastida | |
| Mp1g15440.1 | No alias | component RPL27a of LSU proteome component | 0.04 | Archaeplastida | |
| Mp5g00120.1 | No alias | component RPL27a of LSU proteome component | 0.03 | Archaeplastida | |
| Pp3c16_22430V3.1 | No alias | Ribosomal protein L18e/L15 superfamily protein | 0.08 | Archaeplastida | |
| Pp3c20_18830V3.1 | No alias | Ribosomal protein L18e/L15 superfamily protein | 0.05 | Archaeplastida | |
| Pp3c25_13260V3.1 | No alias | Ribosomal protein L18e/L15 superfamily protein | 0.05 | Archaeplastida | |
| Pp3c5_26860V3.1 | No alias | Ribosomal protein L18e/L15 superfamily protein | 0.04 | Archaeplastida | |
| Pp3c6_3470V3.1 | No alias | Ribosomal protein L18e/L15 superfamily protein | 0.04 | Archaeplastida | |
| Pp3c8_5770V3.1 | No alias | Ribosomal protein L18e/L15 superfamily protein | 0.08 | Archaeplastida | |
| Smo165371 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | Archaeplastida | |
| Solyc03g112360.1.1 | No alias | component RPL27a of LSU proteome component | 0.06 | Archaeplastida | |
| Solyc06g071720.1.1 | No alias | component RPL27a of LSU proteome component | 0.09 | Archaeplastida | |
| Zm00001e010753_P001 | No alias | component RPL27a of LSU proteome component | 0.06 | Archaeplastida | |
| Zm00001e035537_P001 | No alias | component RPL27a of LSU proteome component | 0.12 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | Neighborhood |
| MF | GO:0005198 | structural molecule activity | IEP | Neighborhood |
| CC | GO:0005575 | cellular_component | IEP | Neighborhood |
| CC | GO:0005622 | intracellular | IEP | Neighborhood |
| CC | GO:0005741 | mitochondrial outer membrane | IEP | Neighborhood |
| CC | GO:0005840 | ribosome | IEP | Neighborhood |
| BP | GO:0006412 | translation | IEP | Neighborhood |
| BP | GO:0006518 | peptide metabolic process | IEP | Neighborhood |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0006886 | intracellular protein transport | IEP | Neighborhood |
| BP | GO:0008150 | biological_process | IEP | Neighborhood |
| BP | GO:0008152 | metabolic process | IEP | Neighborhood |
| BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
| BP | GO:0009058 | biosynthetic process | IEP | Neighborhood |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | Neighborhood |
| BP | GO:0009987 | cellular process | IEP | Neighborhood |
| CC | GO:0015934 | large ribosomal subunit | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| CC | GO:0019867 | outer membrane | IEP | Neighborhood |
| CC | GO:0031090 | organelle membrane | IEP | Neighborhood |
| CC | GO:0031966 | mitochondrial membrane | IEP | Neighborhood |
| CC | GO:0031968 | organelle outer membrane | IEP | Neighborhood |
| CC | GO:0032991 | protein-containing complex | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | Neighborhood |
| CC | GO:0035145 | exon-exon junction complex | IEP | Neighborhood |
| BP | GO:0043043 | peptide biosynthetic process | IEP | Neighborhood |
| BP | GO:0043170 | macromolecule metabolic process | IEP | Neighborhood |
| CC | GO:0043226 | organelle | IEP | Neighborhood |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043229 | intracellular organelle | IEP | Neighborhood |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0043603 | cellular amide metabolic process | IEP | Neighborhood |
| BP | GO:0043604 | amide biosynthetic process | IEP | Neighborhood |
| BP | GO:0044237 | cellular metabolic process | IEP | Neighborhood |
| BP | GO:0044238 | primary metabolic process | IEP | Neighborhood |
| BP | GO:0044249 | cellular biosynthetic process | IEP | Neighborhood |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | Neighborhood |
| BP | GO:0044267 | cellular protein metabolic process | IEP | Neighborhood |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | Neighborhood |
| CC | GO:0044391 | ribosomal subunit | IEP | Neighborhood |
| CC | GO:0044422 | organelle part | IEP | Neighborhood |
| CC | GO:0044424 | intracellular part | IEP | Neighborhood |
| CC | GO:0044428 | nuclear part | IEP | Neighborhood |
| CC | GO:0044429 | mitochondrial part | IEP | Neighborhood |
| CC | GO:0044444 | cytoplasmic part | IEP | Neighborhood |
| CC | GO:0044446 | intracellular organelle part | IEP | Neighborhood |
| CC | GO:0044464 | cell part | IEP | Neighborhood |
| BP | GO:0071704 | organic substance metabolic process | IEP | Neighborhood |
| CC | GO:0098588 | bounding membrane of organelle | IEP | Neighborhood |
| CC | GO:0098805 | whole membrane | IEP | Neighborhood |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | Neighborhood |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | Neighborhood |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | Neighborhood |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021131 | Ribosomal_L18e/L15P | 49 | 84 |
| No external refs found! |