1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01007687001

GSVIVT01007687001


Description : Cell cycle.mitosis and meiosis.chromosome segregation.kinetochore proteins.NDC80 outer kinetochore complex.SPC25 component


Gene families : OG0003556 (Archaeplastida) Phylogenetic Tree(s): OG0003556_tree ,
OG_05_0003343 (LandPlants) Phylogenetic Tree(s): OG_05_0003343_tree ,
OG_06_0003166 (SeedPlants) Phylogenetic Tree(s): OG_06_0003166_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007687001
Cluster HCCA: Cluster_53

Target Alias Description ECC score Gene Family Method Actions
AT3G48210 No alias CONTAINS InterPro DOMAIN/s: Kinetochore-Ndc80 complex,... 0.03 Archaeplastida
Cpa|evm.model.tig00020684.34 No alias Cell cycle.mitosis and meiosis.chromosome... 0.03 Archaeplastida
Gb_11408 No alias component SPC25 of NDC80 outer kinetochore complex 0.07 Archaeplastida
LOC_Os01g74170.1 No alias component SPC25 of NDC80 outer kinetochore complex 0.04 Archaeplastida
Mp1g01260.1 No alias component SPC25 of NDC80 outer kinetochore complex 0.07 Archaeplastida
Solyc03g112550.3.1 No alias component SPC25 of NDC80 outer kinetochore complex 0.04 Archaeplastida
Zm00001e018500_P001 No alias component SPC25 of NDC80 outer kinetochore complex 0.03 Archaeplastida
Zm00001e028256_P002 No alias component SPC25 of NDC80 outer kinetochore complex 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
CC GO:0000796 condensin complex IEP Neighborhood
MF GO:0003896 DNA primase activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
BP GO:0006269 DNA replication, synthesis of RNA primer IEP Neighborhood
BP GO:0006323 DNA packaging IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007076 mitotic chromosome condensation IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0030261 chromosome condensation IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1903047 mitotic cell cycle process IEP Neighborhood
InterPro domains Description Start Stop
IPR013255 Spc25 163 231
No external refs found!