GSVIVT01007758001

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor

Gene families : OG0000060 (Archaeplastida) Phylogenetic Tree(s): OG0000060_tree ,
OG_05_0000025 (LandPlants) Phylogenetic Tree(s): OG_05_0000025_tree ,
OG_06_0000055 (SeedPlants) Phylogenetic Tree(s): OG_06_0000055_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01007758001
Cluster	HCCA: Cluster_45

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00010p00264070	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.06	Archaeplastida
AMTR_s00119p00099150	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.C2C2...	0.04	Archaeplastida
AT2G34140	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT2G37590	DOF2.4, ATDOF2.4	DNA binding with one finger 2.4	0.05	Archaeplastida
AT2G46590	DAG2	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT3G52440	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Archaeplastida
AT4G24060	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
AT4G38000	DOF4.7	DNA binding with one finger 4.7	0.03	Archaeplastida
AT5G02460	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Archaeplastida
AT5G39660	CDF2	cycling DOF factor 2	0.02	Archaeplastida
AT5G65590	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Archaeplastida
GSVIVT01011138001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01016887001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
GSVIVT01025119001	No alias	RNA biosynthesis.transcriptional activation.C2C2...	0.03	Archaeplastida
LOC_Os01g64590.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
LOC_Os03g55610.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
LOC_Os12g38200.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
MA_10436933g0020	No alias	transcription factor (DOF)	0.02	Archaeplastida
MA_56828g0010	No alias	transcription factor (DOF)	0.03	Archaeplastida
Pp3c17_23300V3.1	No alias	cycling DOF factor 3	0.03	Archaeplastida
Pp3c17_3860V3.1	No alias	OBF binding protein 4	0.02	Archaeplastida
Pp3c9_4910V3.1	No alias	cycling DOF factor 2	0.02	Archaeplastida
Solyc02g076850.2.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc02g090310.1.1	No alias	transcription factor (DOF)	0.02	Archaeplastida
Solyc03g082840.3.1	No alias	transcription factor (DOF)	0.04	Archaeplastida
Solyc04g070960.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc09g010680.3.1	No alias	transcription factor (DOF)	0.03	Archaeplastida
Solyc10g086440.2.1	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e002951_P002	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e004809_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e005785_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e007228_P002	No alias	transcription factor (DOF)	0.05	Archaeplastida
Zm00001e010454_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e015414_P004	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e015597_P001	No alias	transcription factor (DOF)	0.04	Archaeplastida
Zm00001e023218_P004	No alias	transcription factor (DOF)	0.02	Archaeplastida
Zm00001e023334_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e034454_P001	No alias	transcription factor (DOF)	0.03	Archaeplastida
Zm00001e035892_P001	No alias	transcription factor (DOF)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004175	endopeptidase activity	IEP	Neighborhood
MF	GO:0004252	serine-type endopeptidase activity	IEP	Neighborhood
MF	GO:0004866	endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0004867	serine-type endopeptidase inhibitor activity	IEP	Neighborhood
MF	GO:0008236	serine-type peptidase activity	IEP	Neighborhood
BP	GO:0009611	response to wounding	IEP	Neighborhood
MF	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	IEP	Neighborhood
MF	GO:0017171	serine hydrolase activity	IEP	Neighborhood
MF	GO:0030414	peptidase inhibitor activity	IEP	Neighborhood
MF	GO:0033743	peptide-methionine (R)-S-oxide reductase activity	IEP	Neighborhood
MF	GO:0061134	peptidase regulator activity	IEP	Neighborhood
MF	GO:0061135	endopeptidase regulator activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	52	109

External Links

No external refs found!

GSVIVT01007758001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation