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  5. GSVIVT01007770001

GSVIVT01007770001


Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT3 gamma subunit


Gene families : OG0003845 (Archaeplastida) Phylogenetic Tree(s): OG0003845_tree ,
OG_05_0004402 (LandPlants) Phylogenetic Tree(s): OG_05_0004402_tree ,
OG_06_0005436 (SeedPlants) Phylogenetic Tree(s): OG_06_0005436_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007770001
Cluster HCCA: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00058p00176500 evm_27.TU.AmTr_v1... Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 Archaeplastida
AT5G26360 No alias TCP-1/cpn60 chaperonin family protein 0.08 Archaeplastida
Cpa|evm.model.tig00000615.79 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.03 Archaeplastida
Cre10.g443250 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.08 Archaeplastida
Gb_37345 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.06 Archaeplastida
LOC_Os02g14929.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.11 Archaeplastida
LOC_Os06g34690.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.06 Archaeplastida
MA_37504g0010 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.04 Archaeplastida
Mp7g14360.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.05 Archaeplastida
Pp3c10_13240V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.05 Archaeplastida
Pp3c12_7550V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.03 Archaeplastida
Solyc05g056310.3.1 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.08 Archaeplastida
Zm00001e000822_P001 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.04 Archaeplastida
Zm00001e024916_P001 No alias CCT3 subunit gamma of CCT chaperonin folding complex 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003678 DNA helicase activity IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003735 structural constituent of ribosome IEP Neighborhood
MF GO:0003909 DNA ligase activity IEP Neighborhood
MF GO:0003910 DNA ligase (ATP) activity IEP Neighborhood
MF GO:0003916 DNA topoisomerase activity IEP Neighborhood
MF GO:0004003 ATP-dependent DNA helicase activity IEP Neighborhood
MF GO:0004386 helicase activity IEP Neighborhood
MF GO:0005198 structural molecule activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
CC GO:0005694 chromosome IEP Neighborhood
CC GO:0005730 nucleolus IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
CC GO:0005840 ribosome IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006259 DNA metabolic process IEP Neighborhood
BP GO:0006265 DNA topological change IEP Neighborhood
BP GO:0006281 DNA repair IEP Neighborhood
BP GO:0006310 DNA recombination IEP Neighborhood
BP GO:0006412 translation IEP Neighborhood
BP GO:0006518 peptide metabolic process IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006974 cellular response to DNA damage stimulus IEP Neighborhood
MF GO:0008026 ATP-dependent helicase activity IEP Neighborhood
MF GO:0008094 DNA-dependent ATPase activity IEP Neighborhood
MF GO:0008097 5S rRNA binding IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016886 ligase activity, forming phosphoric ester bonds IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
BP GO:0033554 cellular response to stress IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043043 peptide biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043228 non-membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Neighborhood
BP GO:0043604 amide biosynthetic process IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0051276 chromosome organization IEP Neighborhood
BP GO:0051716 cellular response to stimulus IEP Neighborhood
MF GO:0070035 purine NTP-dependent helicase activity IEP Neighborhood
BP GO:0071103 DNA conformation change IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
MF GO:0140097 catalytic activity, acting on DNA IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 31 524
No external refs found!