AMTR_s00036p00179350 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.89

No description available


Gene families : OG0003128 (Archaeplastida) Phylogenetic Tree(s): OG0003128_tree ,
OG_05_0005282 (LandPlants) Phylogenetic Tree(s): OG_05_0005282_tree ,
OG_06_0005763 (SeedPlants) Phylogenetic Tree(s): OG_06_0005763_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00179350
Cluster HCCA: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
Mp2g23020.1 No alias no hits & (original description: none) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003723 RNA binding IEA Interproscan
BP GO:0006139 nucleobase-containing compound metabolic process IEA Interproscan
MF GO:0008408 3'-5' exonuclease activity IEA Interproscan
Type GO Term Name Evidence Source
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR002562 3'-5'_exonuclease_dom 72 260
IPR004088 KH_dom_type_1 314 369
No external refs found!