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  5. GSVIVT01007800001

GSVIVT01007800001


Description : RING-H2 finger protein ATL48 OS=Arabidopsis thaliana


Gene families : OG0007337 (Archaeplastida) Phylogenetic Tree(s): OG0007337_tree ,
OG_05_0008811 (LandPlants) Phylogenetic Tree(s): OG_05_0008811_tree ,
OG_06_0009352 (SeedPlants) Phylogenetic Tree(s): OG_06_0009352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007800001
Cluster HCCA: Cluster_213

Target Alias Description ECC score Gene Family Method Actions
AT3G48030 No alias hypoxia-responsive family protein / zinc finger... 0.03 Archaeplastida
Cpa|evm.model.tig00021127.9 No alias No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006364 rRNA processing IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
BP GO:0016072 rRNA metabolic process IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016846 carbon-sulfur lyase activity IEP Neighborhood
MF GO:0016853 isomerase activity IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018208 peptidyl-proline modification IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
InterPro domains Description Start Stop
IPR007667 Hypoxia_induced_domain 12 62
No external refs found!