AMTR_s00036p00187360 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.100

Description : Multi-process regulation.programmed cell death.VPE cysteine proteinase


Gene families : OG0001206 (Archaeplastida) Phylogenetic Tree(s): OG0001206_tree ,
OG_05_0001633 (LandPlants) Phylogenetic Tree(s): OG_05_0001633_tree ,
OG_06_0001424 (SeedPlants) Phylogenetic Tree(s): OG_06_0001424_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00187360
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01006037001 No alias Multi-process regulation.programmed cell death.VPE... 0.01 Archaeplastida
Solyc08g079160.3.1 No alias asparaginyl endopeptidase (Legumain). VPE programmed... 0.01 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005672 transcription factor TFIIA complex IEP Neighborhood
BP GO:0006352 DNA-templated transcription, initiation IEP Neighborhood
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044428 nuclear part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001096 Peptidase_C13 43 314
No external refs found!