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  5. AMTR_s00036p00192600

AMTR_s00036p00192600 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00036.105

Description : Enzyme classification.EC_2 transferases.EC_2.1 transferase transferring one-carbon group


Gene families : OG0006242 (Archaeplastida) Phylogenetic Tree(s): OG0006242_tree ,
OG_05_0008239 (LandPlants) Phylogenetic Tree(s): OG_05_0008239_tree ,
OG_06_0009719 (SeedPlants) Phylogenetic Tree(s): OG_06_0009719_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00036p00192600
Cluster HCCA: Cluster_144

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g09750.2 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.03 Archaeplastida
Mp4g16480.1 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.02 Archaeplastida
Zm00001e016567_P003 No alias Enzyme classification.EC_2 transferases.EC_2.1... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006396 RNA processing IEA Interproscan
MF GO:0008173 RNA methyltransferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
BP GO:0001522 pseudouridine synthesis IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003690 double-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003885 D-arabinono-1,4-lactone oxidase activity IEP Neighborhood
MF GO:0004221 obsolete ubiquitin thiolesterase activity IEP Neighborhood
MF GO:0004540 ribonuclease activity IEP Neighborhood
MF GO:0004809 tRNA (guanine-N2-)-methyltransferase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006298 mismatch repair IEP Neighborhood
BP GO:0006399 tRNA metabolic process IEP Neighborhood
BP GO:0008033 tRNA processing IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008175 tRNA methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0008762 UDP-N-acetylmuramate dehydrogenase activity IEP Neighborhood
BP GO:0009451 RNA modification IEP Neighborhood
MF GO:0009982 pseudouridine synthase activity IEP Neighborhood
BP GO:0016073 snRNA metabolic process IEP Neighborhood
BP GO:0016180 snRNA processing IEP Neighborhood
MF GO:0016423 tRNA (guanine) methyltransferase activity IEP Neighborhood
MF GO:0016597 amino acid binding IEP Neighborhood
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Neighborhood
MF GO:0016763 transferase activity, transferring pentosyl groups IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016899 oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0030983 mismatched DNA binding IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
MF GO:0031406 carboxylic acid binding IEP Neighborhood
BP GO:0034470 ncRNA processing IEP Neighborhood
BP GO:0034472 snRNA 3'-end processing IEP Neighborhood
BP GO:0034477 U6 snRNA 3'-end processing IEP Neighborhood
BP GO:0034660 ncRNA metabolic process IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
MF GO:0043177 organic acid binding IEP Neighborhood
BP GO:0043628 ncRNA 3'-end processing IEP Neighborhood
MF GO:0050660 flavin adenine dinucleotide binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
InterPro domains Description Start Stop
IPR010280 U5_MeTrfase_fam 352 541
No external refs found!