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  5. GSVIVT01008001001

GSVIVT01008001001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-v-type E3 ligase


Gene families : OG0000436 (Archaeplastida) Phylogenetic Tree(s): OG0000436_tree ,
OG_05_0000506 (LandPlants) Phylogenetic Tree(s): OG_05_0000506_tree ,
OG_06_0001067 (SeedPlants) Phylogenetic Tree(s): OG_06_0001067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008001001
Cluster HCCA: Cluster_134

Target Alias Description ECC score Gene Family Method Actions
AT1G14260 No alias RING/FYVE/PHD zinc finger superfamily protein 0.03 Archaeplastida
Cre09.g400738 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc03g116030.4.1 No alias RING-v-class E3 ligase 0.03 Archaeplastida
Solyc08g014080.4.1 No alias RING-v-class E3 ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000123 histone acetyltransferase complex IEP Neighborhood
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
CC GO:0031248 protein acetyltransferase complex IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0070461 SAGA-type complex IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
CC GO:1902493 acetyltransferase complex IEP Neighborhood
CC GO:1990234 transferase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 72 117
IPR022143 DUF3675 123 240
No external refs found!