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  5. GSVIVT01008034001

GSVIVT01008034001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0003672 (Archaeplastida) Phylogenetic Tree(s): OG0003672_tree ,
OG_05_0002548 (LandPlants) Phylogenetic Tree(s): OG_05_0002548_tree ,
OG_06_0001410 (SeedPlants) Phylogenetic Tree(s): OG_06_0001410_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008034001
Cluster HCCA: Cluster_48

Target Alias Description ECC score Gene Family Method Actions
AT1G26945 KDR basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT3G47710 BNQ3, BHLH161 BANQUO 3 0.04 Archaeplastida
AT5G15160 BNQ2, BHLH134 BANQUO 2 0.04 Archaeplastida
GSVIVT01008030001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.06 Archaeplastida
GSVIVT01011380001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
LOC_Os03g07540.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os10g26460.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_156285g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Solyc04g005660.4.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e000536_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0007275 multicellular organism development IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
CC GO:0016020 membrane IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0032501 multicellular organismal process IEP Neighborhood
BP GO:0032502 developmental process IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0048856 anatomical structure development IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 19 59
No external refs found!