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  5. GSVIVT01008037001

GSVIVT01008037001


Description : Vesicle trafficking.endomembrane trafficking.protein recycling.Retromer protein recycling complex.VPS29 component


Gene families : OG0005609 (Archaeplastida) Phylogenetic Tree(s): OG0005609_tree ,
OG_05_0007090 (LandPlants) Phylogenetic Tree(s): OG_05_0007090_tree ,
OG_06_0007763 (SeedPlants) Phylogenetic Tree(s): OG_06_0007763_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008037001
Cluster HCCA: Cluster_114

Target Alias Description ECC score Gene Family Method Actions
AT3G47810 MAG1, VPS29, ATVPS29 Calcineurin-like metallo-phosphoesterase superfamily protein 0.04 Archaeplastida
Cre12.g499900 No alias Vesicle trafficking.endomembrane trafficking.protein... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Neighborhood
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Neighborhood
BP GO:0000398 mRNA splicing, via spliceosome IEP Neighborhood
CC GO:0005681 spliceosomal complex IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0008380 RNA splicing IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR024654 Calcineurin-like_PHP_lpxH 6 132
No external refs found!