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  5. GSVIVT01008104001

GSVIVT01008104001


Description : RNA biosynthesis.transcriptional repression.AFP/NINJA transcriptional co-repressor


Gene families : OG0000721 (Archaeplastida) Phylogenetic Tree(s): OG0000721_tree ,
OG_05_0000424 (LandPlants) Phylogenetic Tree(s): OG_05_0000424_tree ,
OG_06_0090256 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008104001
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G13740 AFP2 ABI five binding protein 2 0.01 Archaeplastida
AT1G69260 AFP1 ABI five binding protein 0.04 Archaeplastida
Gb_07890 No alias transcriptional co-repressor (AFP/NINJA) 0.02 Archaeplastida
LOC_Os01g68820.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os07g41160.1 No alias transcriptional co-repressor (AFP/NINJA) 0.05 Archaeplastida
MA_16384g0010 No alias transcriptional co-repressor (AFP/NINJA) 0.01 Archaeplastida
MA_2575g0010 No alias transcriptional co-repressor (AFP/NINJA) 0.04 Archaeplastida
Solyc02g030610.3.1 No alias No annotation 0.03 Archaeplastida
Solyc02g030633.1.1 No alias transcriptional co-repressor (AFP/NINJA) 0.02 Archaeplastida
Solyc02g066855.1.1 No alias transcriptional co-repressor (AFP/NINJA) 0.06 Archaeplastida
Solyc02g066905.1.1 No alias transcriptional co-repressor (AFP/NINJA) 0.02 Archaeplastida
Solyc02g150115.1.1 No alias transcriptional co-repressor (AFP/NINJA) 0.04 Archaeplastida
Solyc04g005380.3.1 No alias transcriptional co-repressor (AFP/NINJA) 0.02 Archaeplastida
Zm00001e035495_P001 No alias transcriptional co-repressor (AFP/NINJA) 0.02 Archaeplastida
Zm00001e038719_P006 No alias transcriptional co-repressor (AFP/NINJA) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0004451 isocitrate lyase activity IEP Neighborhood
MF GO:0004527 exonuclease activity IEP Neighborhood
BP GO:0005985 sucrose metabolic process IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0016157 sucrose synthase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0016833 oxo-acid-lyase activity IEP Neighborhood
BP GO:0019915 lipid storage IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR032308 Jas 924 983
No external refs found!