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Description : Protein biosynthesis.organelle translation machineries.mitochondrial ribosome.mitochondrial ribosome-associated proteins.PPR-type regulatory protein (PNM1)
Gene families : OG0008087 (Archaeplastida) Phylogenetic Tree(s): OG0008087_tree ,
OG_05_0006682 (LandPlants) Phylogenetic Tree(s): OG_05_0006682_tree ,
OG_06_0003761 (SeedPlants) Phylogenetic Tree(s): OG_06_0003761_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01008125001 | |
| Cluster | HCCA: Cluster_236 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G60960 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.04 | Archaeplastida | |
| Gb_15858 | No alias | PPR-type mitochondrial ribosome regulatory protein (PNM1) | 0.02 | Archaeplastida | |
| LOC_Os07g41260.1 | No alias | PPR-type mitochondrial ribosome regulatory protein (PNM1) | 0.03 | Archaeplastida | |
| Solyc03g114920.1.1 | No alias | PPR-type mitochondrial ribosome regulatory protein (PNM1) | 0.03 | Archaeplastida | |
| Zm00001e010734_P001 | No alias | PPR-type mitochondrial ribosome regulatory protein (PNM1) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000049 | tRNA binding | IEP | Neighborhood |
| BP | GO:0000226 | microtubule cytoskeleton organization | IEP | Neighborhood |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | Neighborhood |
| CC | GO:0005875 | microtubule associated complex | IEP | Neighborhood |
| BP | GO:0006397 | mRNA processing | IEP | Neighborhood |
| BP | GO:0006996 | organelle organization | IEP | Neighborhood |
| BP | GO:0007010 | cytoskeleton organization | IEP | Neighborhood |
| BP | GO:0007017 | microtubule-based process | IEP | Neighborhood |
| BP | GO:0007051 | spindle organization | IEP | Neighborhood |
| BP | GO:0016070 | RNA metabolic process | IEP | Neighborhood |
| BP | GO:0016071 | mRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | Neighborhood |
| BP | GO:0022402 | cell cycle process | IEP | Neighborhood |
| BP | GO:0022607 | cellular component assembly | IEP | Neighborhood |
| BP | GO:0043038 | amino acid activation | IEP | Neighborhood |
| BP | GO:0043039 | tRNA aminoacylation | IEP | Neighborhood |
| CC | GO:0044430 | cytoskeletal part | IEP | Neighborhood |
| BP | GO:0051225 | spindle assembly | IEP | Neighborhood |
| CC | GO:0070652 | HAUS complex | IEP | Neighborhood |
| BP | GO:0070925 | organelle assembly | IEP | Neighborhood |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Neighborhood |
| No external refs found! |