Description : RNA processing.organelle machineries.RNA splicing.plastidial RNA intron splicing.cPTH splicing factor

Gene families : OG0001167 (Archaeplastida) Phylogenetic Tree(s): OG0001167_tree ,
OG_05_0001323 (LandPlants) Phylogenetic Tree(s): OG_05_0001323_tree ,
OG_06_0000992 (SeedPlants) Phylogenetic Tree(s): OG_06_0000992_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type Description Actions
Neighborhood HRR: GSVIVT01008257001
Cluster HCCA: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
LOC_Os01g04130.1 No alias Chloroplastic group IIB intron splicing facilitator... 0.01 Archaeplastida
LOC_Os01g49900.1 No alias cPTH plastidial RNA splicing factor 0.04 Archaeplastida
Solyc02g086150.4.1 No alias component CRS2 of CRS2-CAF plastidial RNA splicing... 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
InterPro domains Description Start Stop
IPR001328 Pept_tRNA_hydro 114 292
No external refs found!