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  5. GSVIVT01008305001

GSVIVT01008305001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0003886 (LandPlants) Phylogenetic Tree(s): OG_05_0003886_tree ,
OG_06_0002813 (SeedPlants) Phylogenetic Tree(s): OG_06_0002813_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008305001
Cluster HCCA: Cluster_204

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00085090 evm_27.TU.AmTr_v1... Transcription factor SCREAM2 OS=Arabidopsis thaliana 0.09 Archaeplastida
AMTR_s00019p00254380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00100p00127110 evm_27.TU.AmTr_v1... No description available 0.03 Archaeplastida
AT1G12860 SCRM2, ICE2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G28160 ATBHLH029,... FER-like regulator of iron uptake 0.03 Archaeplastida
AT5G65640 bHLH093 beta HLH protein 93 0.03 Archaeplastida
Gb_05276 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_439607g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_448849g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
Zm00001e013304_P003 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!