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  5. GSVIVT01008324001

GSVIVT01008324001


Description : Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana


Gene families : OG0000559 (Archaeplastida) Phylogenetic Tree(s): OG0000559_tree ,
OG_05_0009842 (LandPlants) Phylogenetic Tree(s): OG_05_0009842_tree ,
OG_06_0008072 (SeedPlants) Phylogenetic Tree(s): OG_06_0008072_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008324001
Cluster HCCA: Cluster_177

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00092720 evm_27.TU.AmTr_v1... Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.09 Archaeplastida
AT1G73805 No alias Calmodulin binding protein-like 0.06 Archaeplastida
AT5G26920 CBP60G Cam-binding protein 60-like G 0.04 Archaeplastida
AT5G57580 No alias Calmodulin-binding protein 0.05 Archaeplastida
AT5G62570 No alias Calmodulin binding protein-like 0.07 Archaeplastida
GSVIVT01003722001 No alias Calmodulin-binding protein 60 E OS=Arabidopsis thaliana 0.05 Archaeplastida
GSVIVT01029152001 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_39213 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.05 Archaeplastida
LOC_Os01g04280.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os03g18960.1 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os09g13890.1 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os12g36110.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.07 Archaeplastida
LOC_Os12g36940.1 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_18754g0010 No alias Calmodulin-binding protein 60 D OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_23963g0010 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.07 Archaeplastida
Solyc01g100240.3.1 No alias Calmodulin-binding protein 60 C OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc03g119250.4.1 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
Solyc10g009210.4.1 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc12g036390.2.1 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Zm00001e016998_P001 No alias Protein SAR DEFICIENT 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e039693_P002 No alias Calmodulin-binding protein 60 B OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
CC GO:0005875 microtubule associated complex IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0009916 alternative oxidase activity IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0030286 dynein complex IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR012416 CBP60 86 374
No external refs found!