GSVIVT01008363001


Description : Cytoskeleton.actin and tubulin folding.CCT chaperonin folding complex.CCT4 delta subunit


Gene families : OG0005274 (Archaeplastida) Phylogenetic Tree(s): OG0005274_tree ,
OG_05_0004969 (LandPlants) Phylogenetic Tree(s): OG_05_0004969_tree ,
OG_06_0005713 (SeedPlants) Phylogenetic Tree(s): OG_06_0005713_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008363001
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AT3G18190 No alias TCP-1/cpn60 chaperonin family protein 0.04 Archaeplastida
Cre05.g234639 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.05 Archaeplastida
LOC_Os02g22780.1 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.04 Archaeplastida
MA_18588g0010 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.04 Archaeplastida
Mp6g14150.1 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.05 Archaeplastida
Pp3c22_2530V3.1 No alias TCP-1/cpn60 chaperonin family protein 0.03 Archaeplastida
Smo80665 No alias Cytoskeleton.actin and tubulin folding.CCT chaperonin... 0.07 Archaeplastida
Zm00001e000128_P002 No alias CCT4 subunit delta of CCT chaperonin folding complex 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Neighborhood
MF GO:0004576 oligosaccharyl transferase activity IEP Neighborhood
MF GO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
CC GO:0005783 endoplasmic reticulum IEP Neighborhood
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008378 galactosyltransferase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR002423 Cpn60/TCP-1 33 270
No external refs found!