Description : DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis thaliana
Gene families : OG0000373 (Archaeplastida) Phylogenetic Tree(s): OG0000373_tree ,
OG_05_0000862 (LandPlants) Phylogenetic Tree(s): OG_05_0000862_tree ,
OG_06_0000964 (SeedPlants) Phylogenetic Tree(s): OG_06_0000964_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: GSVIVT01008365001 | |
Cluster | HCCA: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G48650 | No alias | DEA(D/H)-box RNA helicase family protein | 0.1 | Archaeplastida | |
Gb_08623 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.04 | Archaeplastida | |
MA_10437209g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.02 | Archaeplastida | |
MA_109435g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
MA_22839g0010 | No alias | DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... | 0.03 | Archaeplastida | |
Solyc03g118920.3.1 | No alias | DExH-box ATP-dependent RNA helicase DExH3 OS=Arabidopsis... | 0.06 | Archaeplastida | |
Solyc04g007510.4.1 | No alias | DExH-box ATP-dependent RNA helicase DExH5, mitochondrial... | 0.05 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004386 | helicase activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000394 | RNA splicing, via endonucleolytic cleavage and ligation | IEP | Neighborhood |
MF | GO:0003972 | RNA ligase (ATP) activity | IEP | Neighborhood |
BP | GO:0006388 | tRNA splicing, via endonucleolytic cleavage and ligation | IEP | Neighborhood |
BP | GO:0006415 | translational termination | IEP | Neighborhood |
BP | GO:0006814 | sodium ion transport | IEP | Neighborhood |
MF | GO:0008270 | zinc ion binding | IEP | Neighborhood |
BP | GO:0008380 | RNA splicing | IEP | Neighborhood |
MF | GO:0008452 | RNA ligase activity | IEP | Neighborhood |
MF | GO:0016886 | ligase activity, forming phosphoric ester bonds | IEP | Neighborhood |
BP | GO:0022411 | cellular component disassembly | IEP | Neighborhood |
CC | GO:0030684 | preribosome | IEP | Neighborhood |
CC | GO:0032040 | small-subunit processome | IEP | Neighborhood |
BP | GO:0032984 | protein-containing complex disassembly | IEP | Neighborhood |
MF | GO:0033926 | glycopeptide alpha-N-acetylgalactosaminidase activity | IEP | Neighborhood |
MF | GO:0043167 | ion binding | IEP | Neighborhood |
MF | GO:0043169 | cation binding | IEP | Neighborhood |
BP | GO:0043624 | cellular protein complex disassembly | IEP | Neighborhood |
MF | GO:0046872 | metal ion binding | IEP | Neighborhood |
MF | GO:0046914 | transition metal ion binding | IEP | Neighborhood |
MF | GO:0140103 | catalytic activity, acting on a glycoprotein | IEP | Neighborhood |
No external refs found! |