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  5. GSVIVT01008637001

GSVIVT01008637001


Description : External stimuli response.temperature.ICE-CBF cold acclimation transcriptional cascade.ICE1/2 transcription factor


Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0001343 (LandPlants) Phylogenetic Tree(s): OG_05_0001343_tree ,
OG_06_0001632 (SeedPlants) Phylogenetic Tree(s): OG_06_0001632_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008637001
Cluster HCCA: Cluster_11

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00170610 evm_27.TU.AmTr_v1... External stimuli response.temperature.ICE-CBF cold... 0.04 Archaeplastida
AMTR_s00019p00254380 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
AMTR_s00100p00127110 evm_27.TU.AmTr_v1... No description available 0.02 Archaeplastida
AT1G12860 SCRM2, ICE2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT2G16910 AMS basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT3G26744 ATICE1, ICE1, SCRM basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT4G21330 DYT1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Archaeplastida
AT5G57150 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Cpa|evm.model.tig00020510.134 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
GSVIVT01009234001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
GSVIVT01013744001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
GSVIVT01013745001 No alias Transcription factor bHLH90 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01032998001 No alias External stimuli response.temperature.ICE-CBF cold... 0.04 Archaeplastida
LOC_Os02g02820.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os11g32100.1 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.04 Archaeplastida
MA_439607g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
Mp2g02460.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c1_20960V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c8_18070V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Smo16039 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
Solyc02g091690.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc06g051550.4.1 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.03 Archaeplastida
Zm00001e013304_P003 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e018755_P001 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.03 Archaeplastida
Zm00001e021526_P001 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.07 Archaeplastida
Zm00001e030156_P003 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Neighborhood
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Neighborhood
CC GO:0005741 mitochondrial outer membrane IEP Neighborhood
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Neighborhood
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
CC GO:0031966 mitochondrial membrane IEP Neighborhood
CC GO:0031968 organelle outer membrane IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
CC GO:0044459 plasma membrane part IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
CC GO:0098797 plasma membrane protein complex IEP Neighborhood
CC GO:0098805 whole membrane IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 301 343
No external refs found!