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  5. GSVIVT01008655001

GSVIVT01008655001


Description : RNA biosynthesis.transcriptional activation.LFY transcription factor


Gene families : OG0006256 (Archaeplastida) Phylogenetic Tree(s): OG0006256_tree ,
OG_05_0005303 (LandPlants) Phylogenetic Tree(s): OG_05_0005303_tree ,
OG_06_0009895 (SeedPlants) Phylogenetic Tree(s): OG_06_0009895_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008655001
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00083040 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.LFY... 0.03 Archaeplastida
Gb_05859 No alias transcription factor (LFY) 0.04 Archaeplastida
LOC_Os04g51000.1 No alias transcription factor (LFY) 0.06 Archaeplastida
Zm00001e007066_P002 No alias transcription factor (LFY) 0.03 Archaeplastida
Zm00001e041565_P001 No alias transcription factor (LFY) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR035209 FLO/LFY_C 192 358
IPR035079 LFY_SAM 29 105
No external refs found!