1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01008673001

GSVIVT01008673001


Description : Carbohydrate metabolism.starch metabolism.synthesis.starch branching enzyme


Gene families : OG0001006 (Archaeplastida) Phylogenetic Tree(s): OG0001006_tree ,
OG_05_0002115 (LandPlants) Phylogenetic Tree(s): OG_05_0002115_tree ,
OG_06_0011285 (SeedPlants) Phylogenetic Tree(s): OG_06_0011285_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008673001
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00040p00188540 evm_27.TU.AmTr_v1... Carbohydrate metabolism.starch... 0.02 Archaeplastida
AT2G36390 SBE2.1, BE3 starch branching enzyme 2.1 0.04 Archaeplastida
GSVIVT01033801001 No alias Carbohydrate metabolism.starch... 0.1 Archaeplastida
Gb_33676 No alias starch branching enzyme 0.03 Archaeplastida
LOC_Os02g32660.1 No alias starch branching enzyme 0.01 Archaeplastida
LOC_Os06g51084.1 No alias starch branching enzyme 0.01 Archaeplastida
MA_15024g0020 No alias 1,4-alpha-glucan-branching enzyme 1,... 0.09 Archaeplastida
Solyc09g009190.4.1 No alias starch branching enzyme 0.05 Archaeplastida
Zm00001e013321_P002 No alias starch branching enzyme 0.03 Archaeplastida
Zm00001e014711_P001 No alias starch branching enzyme 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004645 phosphorylase activity IEP Neighborhood
MF GO:0008184 glycogen phosphorylase activity IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
InterPro domains Description Start Stop
IPR006048 A-amylase/branching_C 677 777
IPR004193 Glyco_hydro_13_N 142 225
IPR006047 Glyco_hydro_13_cat_dom 313 388
No external refs found!