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  5. GSVIVT01008686001

GSVIVT01008686001


Description : ATP-dependent zinc metalloprotease FTSH 1, chloroplastic OS=Oryza sativa subsp. japonica


Gene families : OG0000346 (Archaeplastida) Phylogenetic Tree(s): OG0000346_tree ,
OG_05_0006013 (LandPlants) Phylogenetic Tree(s): OG_05_0006013_tree ,
OG_06_0009034 (SeedPlants) Phylogenetic Tree(s): OG_06_0009034_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008686001
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00232760 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.02 Archaeplastida
AMTR_s00106p00108310 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.metallopeptidase... 0.03 Archaeplastida
AT1G06430 FTSH8 FTSH protease 8 0.03 Archaeplastida
AT1G50250 FTSH1 FTSH protease 1 0.05 Archaeplastida
AT5G42270 FTSH5, VAR1 FtsH extracellular protease family 0.03 Archaeplastida
Cpa|evm.model.tig00000704.23 No alias ATP-dependent zinc metalloprotease FTSH 1, chloroplastic... 0.01 Archaeplastida
Cre09.g393950 No alias Probable inactive ATP-dependent zinc metalloprotease... 0.02 Archaeplastida
Cre12.g485800 No alias Protein degradation.peptidase families.metallopeptidase... 0.04 Archaeplastida
Cre17.g720050 No alias Protein degradation.peptidase families.metallopeptidase... 0.05 Archaeplastida
Gb_06887 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 Archaeplastida
Gb_12830 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 Archaeplastida
Gb_32360 No alias component FtsHi of protein translocation ATPase motor complex 0.02 Archaeplastida
LOC_Os06g45820.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.09 Archaeplastida
LOC_Os06g51029.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.07 Archaeplastida
MA_188257g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
MA_98203g0010 No alias No annotation 0.04 Archaeplastida
Mp3g08790.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 Archaeplastida
Mp4g19200.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.02 Archaeplastida
Pp3c12_22830V3.1 No alias FtsH extracellular protease family 0.02 Archaeplastida
Pp3c20_15780V3.1 No alias FtsH extracellular protease family 0.06 Archaeplastida
Pp3c23_14665V3.1 No alias FtsH extracellular protease family 0.02 Archaeplastida
Pp3c23_8400V3.1 No alias FtsH extracellular protease family 0.03 Archaeplastida
Smo139726 No alias Protein degradation.peptidase families.metallopeptidase... 0.04 Archaeplastida
Solyc07g055320.4.1 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.06 Archaeplastida
Zm00001e030153_P001 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.11 Archaeplastida
Zm00001e030358_P003 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.11 Archaeplastida
Zm00001e037753_P001 No alias component FtsH1|2|5|6|8 of FtsH plastidial protease complexes 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003747 translation release factor activity IEP Neighborhood
MF GO:0004602 glutathione peroxidase activity IEP Neighborhood
BP GO:0006415 translational termination IEP Neighborhood
BP GO:0006790 sulfur compound metabolic process IEP Neighborhood
MF GO:0008079 translation termination factor activity IEP Neighborhood
CC GO:0009521 photosystem IEP Neighborhood
CC GO:0009523 photosystem II IEP Neighborhood
CC GO:0009654 photosystem II oxygen evolving complex IEP Neighborhood
BP GO:0015979 photosynthesis IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
BP GO:0016226 iron-sulfur cluster assembly IEP Neighborhood
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Neighborhood
CC GO:0019898 extrinsic component of membrane IEP Neighborhood
BP GO:0022411 cellular component disassembly IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0030163 protein catabolic process IEP Neighborhood
BP GO:0031163 metallo-sulfur cluster assembly IEP Neighborhood
BP GO:0032984 protein-containing complex disassembly IEP Neighborhood
CC GO:0034357 photosynthetic membrane IEP Neighborhood
CC GO:0042651 thylakoid membrane IEP Neighborhood
BP GO:0043624 cellular protein complex disassembly IEP Neighborhood
CC GO:0044436 thylakoid part IEP Neighborhood
BP GO:0051186 cofactor metabolic process IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
CC GO:1902494 catalytic complex IEP Neighborhood
CC GO:1990204 oxidoreductase complex IEP Neighborhood
InterPro domains Description Start Stop
IPR000642 Peptidase_M41 334 527
IPR003959 ATPase_AAA_core 146 204
IPR003959 ATPase_AAA_core 205 252
No external refs found!