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  5. GSVIVT01008805001

GSVIVT01008805001


Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.class II/ASH1 histone methyltransferase component


Gene families : OG0000350 (Archaeplastida) Phylogenetic Tree(s): OG0000350_tree ,
OG_05_0005295 (LandPlants) Phylogenetic Tree(s): OG_05_0005295_tree ,
OG_06_0007372 (SeedPlants) Phylogenetic Tree(s): OG_06_0007372_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008805001
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00244380 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
AMTR_s00022p00081590 evm_27.TU.AmTr_v1... Chromatin organisation.histone modifications.histone... 0.01 Archaeplastida
AT1G77300 LAZ2, CCR1,... histone methyltransferases(H3-K4 specific);histone... 0.1 Archaeplastida
AT5G42400 SDG25, ATXR7 SET domain protein 25 0.08 Archaeplastida
Cpa|evm.model.tig00000488.8 No alias Chromatin organisation.histone modifications.histone... 0.01 Archaeplastida
Cre09.g392542 No alias Chromatin organisation.histone modifications.histone... 0.03 Archaeplastida
Cre11.g475950 No alias Histone-lysine N-methyltransferase ATXR7 OS=Arabidopsis thaliana 0.01 Archaeplastida
Gb_04139 No alias class III/Trithorax histone methyltransferase component... 0.06 Archaeplastida
Gb_19296 No alias class II/ASH1 histone methyltransferase component of... 0.09 Archaeplastida
LOC_Os02g34850.1 No alias class II/ASH1 histone methyltransferase component of... 0.11 Archaeplastida
LOC_Os12g41900.1 No alias class III/Trithorax histone methyltransferase component... 0.02 Archaeplastida
MA_10427044g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_18041g0010 No alias class III/Trithorax histone methyltransferase component... 0.09 Archaeplastida
Mp1g17790.1 No alias class III/Trithorax histone methyltransferase component... 0.12 Archaeplastida
Mp8g18560.1 No alias class II/ASH1 histone methyltransferase component of... 0.13 Archaeplastida
Pp3c1_33770V3.1 No alias histone methyltransferases(H3-K4 specific);histone... 0.05 Archaeplastida
Pp3c24_20920V3.1 No alias SET domain protein 25 0.13 Archaeplastida
Pp3c2_12540V3.1 No alias histone methyltransferases(H3-K4 specific);histone... 0.15 Archaeplastida
Solyc04g057880.3.1 No alias class II/ASH1 histone methyltransferase component of... 0.05 Archaeplastida
Solyc06g059960.4.1 No alias class II/ASH1 histone methyltransferase component of... 0.12 Archaeplastida
Solyc07g008460.3.1 No alias class II/ASH1 histone methyltransferase component of... 0.03 Archaeplastida
Zm00001e014806_P003 No alias class II/ASH1 histone methyltransferase component of... 0.11 Archaeplastida
Zm00001e039307_P005 No alias class III/Trithorax histone methyltransferase component... 0.1 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0004402 histone acetyltransferase activity IEP Neighborhood
MF GO:0005524 ATP binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
CC GO:0005667 transcription factor complex IEP Neighborhood
CC GO:0005669 transcription factor TFIID complex IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006351 transcription, DNA-templated IEP Neighborhood
BP GO:0006473 protein acetylation IEP Neighborhood
BP GO:0006475 internal protein amino acid acetylation IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008080 N-acetyltransferase activity IEP Neighborhood
MF GO:0008144 drug binding IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016407 acetyltransferase activity IEP Neighborhood
MF GO:0016410 N-acyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0016573 histone acetylation IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018130 heterocycle biosynthetic process IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0018393 internal peptidyl-lysine acetylation IEP Neighborhood
BP GO:0018394 peptidyl-lysine acetylation IEP Neighborhood
BP GO:0019438 aromatic compound biosynthetic process IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
BP GO:0032774 RNA biosynthetic process IEP Neighborhood
MF GO:0034212 peptide N-acetyltransferase activity IEP Neighborhood
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0043543 protein acylation IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
CC GO:0044798 nuclear transcription factor complex IEP Neighborhood
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
CC GO:0090575 RNA polymerase II transcription factor complex IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
BP GO:0097659 nucleic acid-templated transcription IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
BP GO:1901362 organic cyclic compound biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR011124 Znf_CW 1105 1151
IPR001214 SET_dom 1276 1382
No external refs found!