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  5. GSVIVT01008932001

GSVIVT01008932001


Description : Protein terminal ear1 homolog OS=Oryza sativa subsp. indica


Gene families : OG0001662 (Archaeplastida) Phylogenetic Tree(s): OG0001662_tree ,
OG_05_0001155 (LandPlants) Phylogenetic Tree(s): OG_05_0001155_tree ,
OG_06_0000931 (SeedPlants) Phylogenetic Tree(s): OG_06_0000931_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01008932001
Cluster HCCA: Cluster_145

Target Alias Description ECC score Gene Family Method Actions
AT1G37140 MCT1 MEI2 C-terminal RRM only like 1 0.07 Archaeplastida
AT1G67770 TEL2 terminal EAR1-like 2 0.04 Archaeplastida
AT5G07930 MCT2 MEI2 C-terminal RRM only like 2 0.07 Archaeplastida
Gb_20291 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.04 Archaeplastida
LOC_Os09g36140.1 No alias Protein MEI2-like 6 OS=Oryza sativa subsp. japonica... 0.03 Archaeplastida
MA_477594g0010 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.02 Archaeplastida
Solyc05g056360.2.1 No alias Protein terminal ear1 homolog OS=Oryza sativa subsp.... 0.03 Archaeplastida
Zm00001e018912_P001 No alias Protein terminal ear1 OS=Zea mays (sp|o65001|te1_maize : 874.0) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
InterPro domains Description Start Stop
IPR007201 Mei2-like_Rrm_C 193 305
No external refs found!