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  5. GSVIVT01009072001

GSVIVT01009072001


Description : Protein biosynthesis.cytosolic ribosome.small subunit (SSU).SSU proteome.RPS6 component


Gene families : OG0002153 (Archaeplastida) Phylogenetic Tree(s): OG0002153_tree ,
OG_05_0001864 (LandPlants) Phylogenetic Tree(s): OG_05_0001864_tree ,
OG_06_0002064 (SeedPlants) Phylogenetic Tree(s): OG_06_0002064_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009072001
Cluster HCCA: Cluster_69

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00038p00238890 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.02 Archaeplastida
AMTR_s00048p00058600 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
AMTR_s00077p00035710 evm_27.TU.AmTr_v1... Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
AT4G31700 RPS6A, RPS6 ribosomal protein S6 0.14 Archaeplastida
AT5G10360 EMB3010, RPS6B Ribosomal protein S6e 0.19 Archaeplastida
Cpa|evm.model.tig00000704.73 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.17 Archaeplastida
Cre09.g400650 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.05 Archaeplastida
LOC_Os03g27260.1 No alias component RPS6 of SSU proteome 0.14 Archaeplastida
LOC_Os07g42950.1 No alias component RPS6 of SSU proteome 0.16 Archaeplastida
MA_10426804g0010 No alias component RPS6 of SSU proteome 0.07 Archaeplastida
MA_72828g0010 No alias component RPS6 of SSU proteome 0.09 Archaeplastida
Mp4g01750.1 No alias component RPS6 of SSU proteome 0.22 Archaeplastida
Pp3c11_21120V3.1 No alias Ribosomal protein S6e 0.11 Archaeplastida
Pp3c15_25430V3.1 No alias Ribosomal protein S6e 0.07 Archaeplastida
Pp3c15_25780V3.1 No alias Ribosomal protein S6e 0.21 Archaeplastida
Pp3c7_5780V3.1 No alias Ribosomal protein S6e 0.15 Archaeplastida
Smo172795 No alias Protein biosynthesis.cytosolic ribosome.small subunit... 0.11 Archaeplastida
Solyc08g006040.3.1 No alias component RPS6 of SSU proteome 0.1 Archaeplastida
Solyc08g074240.3.1 No alias component RPS6 of SSU proteome 0.16 Archaeplastida
Solyc12g096300.2.1 No alias component RPS6 of SSU proteome 0.17 Archaeplastida
Zm00001e010802_P001 No alias component RPS6 of SSU proteome 0.17 Archaeplastida
Zm00001e035580_P002 No alias component RPS6 of SSU proteome 0.15 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005622 intracellular IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000276 mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
MF GO:0001882 nucleoside binding IEP Neighborhood
MF GO:0001883 purine nucleoside binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003746 translation elongation factor activity IEP Neighborhood
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004150 dihydroneopterin aldolase activity IEP Neighborhood
MF GO:0004455 ketol-acid reductoisomerase activity IEP Neighborhood
MF GO:0005525 GTP binding IEP Neighborhood
BP GO:0006414 translational elongation IEP Neighborhood
BP GO:0006575 cellular modified amino acid metabolic process IEP Neighborhood
BP GO:0006760 folic acid-containing compound metabolic process IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
MF GO:0008963 phospho-N-acetylmuramoyl-pentapeptide-transferase activity IEP Neighborhood
BP GO:0009081 branched-chain amino acid metabolic process IEP Neighborhood
BP GO:0009082 branched-chain amino acid biosynthetic process IEP Neighborhood
BP GO:0015985 energy coupled proton transport, down electrochemical gradient IEP Neighborhood
BP GO:0015986 ATP synthesis coupled proton transport IEP Neighborhood
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Neighborhood
MF GO:0016832 aldehyde-lyase activity IEP Neighborhood
MF GO:0019001 guanyl nucleotide binding IEP Neighborhood
CC GO:0030008 TRAPP complex IEP Neighborhood
MF GO:0032549 ribonucleoside binding IEP Neighborhood
MF GO:0032550 purine ribonucleoside binding IEP Neighborhood
MF GO:0032561 guanyl ribonucleotide binding IEP Neighborhood
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP Neighborhood
BP GO:0042558 pteridine-containing compound metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
CC GO:0044455 mitochondrial membrane part IEP Neighborhood
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP Neighborhood
CC GO:0098798 mitochondrial protein complex IEP Neighborhood
CC GO:0098800 inner mitochondrial membrane protein complex IEP Neighborhood
InterPro domains Description Start Stop
IPR001377 Ribosomal_S6e 1 128
No external refs found!