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  5. GSVIVT01009083001

GSVIVT01009083001


Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.HD-ZIP I/II transcription factor


Gene families : OG0000146 (Archaeplastida) Phylogenetic Tree(s): OG0000146_tree ,
OG_05_0000061 (LandPlants) Phylogenetic Tree(s): OG_05_0000061_tree ,
OG_06_0000101 (SeedPlants) Phylogenetic Tree(s): OG_06_0000101_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009083001
Cluster HCCA: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00253290 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.08 Archaeplastida
AT5G15150 ATHB3, HB-3, ATHB-3, HAT7 homeobox 3 0.03 Archaeplastida
AT5G65310 ATHB5, ATHB-5, HB5 homeobox protein 5 0.04 Archaeplastida
LOC_Os10g26500.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Pp3c17_18190V3.1 No alias homeobox protein 16 0.02 Archaeplastida
Pp3c3_37710V3.1 No alias homeobox 3 0.03 Archaeplastida
Pp3c8_440V3.1 No alias homeobox 3 0.02 Archaeplastida
Solyc02g077590.1.1 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida
Solyc03g034110.4.1 No alias transcription factor (HD-ZIP I/II) 0.05 Archaeplastida
Zm00001e000659_P001 No alias transcription factor (HD-ZIP I/II) 0.06 Archaeplastida
Zm00001e004824_P001 No alias transcription factor (HD-ZIP I/II) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006855 drug transmembrane transport IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
BP GO:0015893 drug transport IEP Neighborhood
InterPro domains Description Start Stop
IPR003106 Leu_zip_homeo 112 154
IPR001356 Homeobox_dom 57 110
No external refs found!