1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01009098001

GSVIVT01009098001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-H2-type E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0001529 (LandPlants) Phylogenetic Tree(s): OG_05_0001529_tree ,
OG_06_0000773 (SeedPlants) Phylogenetic Tree(s): OG_06_0000773_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009098001
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271850 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AMTR_s00021p00161170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AMTR_s00077p00070720 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
AMTR_s00102p00069840 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.03 Archaeplastida
AT1G04360 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G49210 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G49220 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT1G49230 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT1G53010 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT1G67856 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT2G17730 NIP2 NEP-interacting protein 2 0.03 Archaeplastida
AT2G27940 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42350 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT2G42360 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT3G19140 DNF RING/U-box superfamily protein 0.04 Archaeplastida
AT3G60966 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT4G00305 No alias RING/U-box superfamily protein 0.05 Archaeplastida
AT4G11370 RHA1A RING-H2 finger A1A 0.04 Archaeplastida
AT4G15975 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G38140 No alias RING/U-box superfamily protein 0.03 Archaeplastida
AT5G07040 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G41400 No alias RING/U-box superfamily protein 0.02 Archaeplastida
AT5G42200 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT5G58580 ATL63, TL63 TOXICOS EN LEVADURA 63 0.03 Archaeplastida
Cpa|evm.model.tig00020943.22 No alias Protein degradation.peptide tagging.Ubiquitin... 0.01 Archaeplastida
GSVIVT01008754001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
GSVIVT01019585001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
GSVIVT01020665001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_02533 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_04301 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_04647 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_05386 No alias RHA2 signal transducer of abscisic acid perception 0.03 Archaeplastida
Gb_14312 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Gb_14777 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Gb_14788 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Gb_23066 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_28980 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_30879 No alias Probable E3 ubiquitin-protein ligase XERICO... 0.02 Archaeplastida
Gb_35043 No alias NEP1-interacting protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_35824 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g11460.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g11500.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os01g53500.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g60730.2 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os01g64620.1 No alias RING-H2 finger protein ATL72 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os02g15060.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g35329.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os02g36330.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os03g22110.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os03g28080.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os03g44636.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os03g57410.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os04g16970.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g37740.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os04g49000.1 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os04g49160.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g49550.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os05g15170.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
LOC_Os05g29676.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g29710.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os05g39260.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os05g45060.1 No alias RING-H2 finger protein ATL68 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os06g09310.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
LOC_Os06g11450.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
LOC_Os06g16060.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34530.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g34560.1 No alias no hits & (original description: none) 0.05 Archaeplastida
LOC_Os06g34620.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
LOC_Os09g36500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g39770.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os10g39936.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os11g47690.1 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_10429091g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_12363g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_159453g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_226198g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_25345g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_31462g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_31736g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_43543g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_462422g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_552961g0010 No alias RING-H2 finger protein ATL70 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_83882g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_85088g0010 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Mp4g15970.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Mp5g08270.1 No alias RING-H2-class E3 ligase 0.05 Archaeplastida
Pp3c14_14600V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c22_15440V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_10580V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c23_1651V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c26_11650V3.1 No alias TOXICOS EN LEVADURA 2 0.05 Archaeplastida
Pp3c4_30240V3.1 No alias TOXICOS EN LEVADURA 2 0.03 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Smo438800 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Smo96681 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
Solyc01g006910.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc01g105620.4.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc01g109200.4.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc02g083660.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g005490.4.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc03g114090.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc03g123680.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc04g009780.1.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.02 Archaeplastida
Solyc04g074820.3.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Solyc05g010170.2.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc05g010175.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc06g150136.1.1 No alias RING-H2-class E3 ligase 0.06 Archaeplastida
Solyc07g053420.4.1 No alias no hits & (original description: none) 0.07 Archaeplastida
Solyc09g075320.1.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Solyc10g009487.1.1 No alias RING-H2 finger protein ATL20 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Solyc10g011880.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc10g081780.3.1 No alias Putative RING-H2 finger protein ATL71 OS=Arabidopsis... 0.03 Archaeplastida
Solyc10g081790.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005290.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g005320.1.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g007530.2.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Solyc11g066510.3.1 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e000398_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e002272_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e003426_P001 No alias ubiquitin protein ligase (XERICO) 0.02 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e008560_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e009142_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e010787_P001 No alias RING-H2 finger protein ATL3 OS=Arabidopsis thaliana... 0.04 Archaeplastida
Zm00001e011306_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e014286_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e015449_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e015470_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e017509_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e017960_P001 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e019779_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e022742_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023234_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023238_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023515_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023585_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e023723_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023832_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e024702_P002 No alias NEP1-interacting protein-like 1 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e026193_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e026906_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e029032_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e030930_P001 No alias no hits & (original description: none) 0.05 Archaeplastida
Zm00001e031105_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e032186_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e041385_P001 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
Zm00001e041409_P001 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000271 polysaccharide biosynthetic process IEP Neighborhood
MF GO:0004089 carbonate dehydratase activity IEP Neighborhood
MF GO:0004506 squalene monooxygenase activity IEP Neighborhood
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
BP GO:0005976 polysaccharide metabolic process IEP Neighborhood
BP GO:0006073 cellular glucan metabolic process IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008194 UDP-glycosyltransferase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0016051 carbohydrate biosynthetic process IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0033692 cellular polysaccharide biosynthetic process IEP Neighborhood
BP GO:0034637 cellular carbohydrate biosynthetic process IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
BP GO:0044042 glucan metabolic process IEP Neighborhood
BP GO:0044262 cellular carbohydrate metabolic process IEP Neighborhood
BP GO:0044264 cellular polysaccharide metabolic process IEP Neighborhood
MF GO:0046527 glucosyltransferase activity IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
InterPro domains Description Start Stop
IPR001841 Znf_RING 131 174
No external refs found!