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Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor
Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01009128001 | |
| Cluster | HCCA: Cluster_59 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00099p00145100 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.04 | Archaeplastida | |
| AMTR_s00119p00074870 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.03 | Archaeplastida | |
| AMTR_s00135p00085840 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.HB... | 0.03 | Archaeplastida | |
| AT1G14440 | AtHB31, ZHD4, HB31 | homeobox protein 31 | 0.04 | Archaeplastida | |
| AT1G14687 | AtHB32, HB32, ZHD14 | homeobox protein 32 | 0.05 | Archaeplastida | |
| Gb_30985 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida | |
| LOC_Os02g47770.1 | No alias | transcription factor (zf-HD) | 0.02 | Archaeplastida | |
| LOC_Os08g34010.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| LOC_Os08g37400.1 | No alias | transcription factor (zf-HD) | 0.07 | Archaeplastida | |
| LOC_Os11g13930.1 | No alias | transcription factor (zf-HD) | 0.05 | Archaeplastida | |
| MA_19630g0030 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| MA_470326g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| MA_69304g0010 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Solyc04g080490.4.1 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Zm00001e008082_P001 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| Zm00001e009830_P001 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Zm00001e015590_P001 | No alias | transcription factor (zf-HD) | 0.04 | Archaeplastida | |
| Zm00001e018364_P001 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Zm00001e022486_P001 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Zm00001e023331_P001 | No alias | transcription factor (zf-HD) | 0.03 | Archaeplastida | |
| Zm00001e034407_P001 | No alias | transcription factor (zf-HD) | 0.06 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003697 | single-stranded DNA binding | IEP | Neighborhood |
| MF | GO:0003883 | CTP synthase activity | IEP | Neighborhood |
| MF | GO:0004014 | adenosylmethionine decarboxylase activity | IEP | Neighborhood |
| MF | GO:0005542 | folic acid binding | IEP | Neighborhood |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0006220 | pyrimidine nucleotide metabolic process | IEP | Neighborhood |
| BP | GO:0006221 | pyrimidine nucleotide biosynthetic process | IEP | Neighborhood |
| BP | GO:0006364 | rRNA processing | IEP | Neighborhood |
| BP | GO:0006576 | cellular biogenic amine metabolic process | IEP | Neighborhood |
| BP | GO:0006595 | polyamine metabolic process | IEP | Neighborhood |
| BP | GO:0006596 | polyamine biosynthetic process | IEP | Neighborhood |
| BP | GO:0006597 | spermine biosynthetic process | IEP | Neighborhood |
| MF | GO:0008168 | methyltransferase activity | IEP | Neighborhood |
| BP | GO:0008215 | spermine metabolic process | IEP | Neighborhood |
| BP | GO:0008216 | spermidine metabolic process | IEP | Neighborhood |
| BP | GO:0008295 | spermidine biosynthetic process | IEP | Neighborhood |
| BP | GO:0009308 | amine metabolic process | IEP | Neighborhood |
| BP | GO:0009309 | amine biosynthetic process | IEP | Neighborhood |
| MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Neighborhood |
| MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Neighborhood |
| BP | GO:0016072 | rRNA metabolic process | IEP | Neighborhood |
| MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Neighborhood |
| MF | GO:0016741 | transferase activity, transferring one-carbon groups | IEP | Neighborhood |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | Neighborhood |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Neighborhood |
| MF | GO:0016879 | ligase activity, forming carbon-nitrogen bonds | IEP | Neighborhood |
| MF | GO:0031406 | carboxylic acid binding | IEP | Neighborhood |
| MF | GO:0033218 | amide binding | IEP | Neighborhood |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Neighborhood |
| MF | GO:0042393 | histone binding | IEP | Neighborhood |
| BP | GO:0042401 | cellular biogenic amine biosynthetic process | IEP | Neighborhood |
| MF | GO:0043177 | organic acid binding | IEP | Neighborhood |
| BP | GO:0044106 | cellular amine metabolic process | IEP | Neighborhood |
| MF | GO:0072341 | modified amino acid binding | IEP | Neighborhood |
| BP | GO:0072527 | pyrimidine-containing compound metabolic process | IEP | Neighborhood |
| BP | GO:0072528 | pyrimidine-containing compound biosynthetic process | IEP | Neighborhood |
| BP | GO:0097164 | ammonium ion metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006456 | ZF_HD_homeobox_Cys/His_dimer | 103 | 155 |
| No external refs found! |