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  5. AMTR_s00037p00031790

AMTR_s00037p00031790 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00037.9

No description available


Gene families : OG0000075 (Archaeplastida) Phylogenetic Tree(s): OG0000075_tree ,
OG_05_0000104 (LandPlants) Phylogenetic Tree(s): OG_05_0000104_tree ,
OG_06_0000194 (SeedPlants) Phylogenetic Tree(s): OG_06_0000194_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00037p00031790
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00271680 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 26 OS=Arabidopsis thaliana 0.06 Archaeplastida
AMTR_s00030p00214230 evm_27.TU.AmTr_v1... NDR1/HIN1-like protein 10 OS=Arabidopsis thaliana 0.03 Archaeplastida
AT3G44220 No alias Late embryogenesis abundant (LEA) hydroxyproline-rich... 0.02 Archaeplastida
LOC_Os01g64450.1 No alias NDR1/HIN1-like protein 3 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_47856g0010 No alias NDR1/HIN1-like protein 12 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_669170g0020 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_7708687g0010 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc11g069970.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e008171_P001 No alias NDR1/HIN1-like protein 1 OS=Arabidopsis thaliana... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
InterPro domains Description Start Stop
IPR004864 LEA_2 82 184
No external refs found!