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  5. GSVIVT01009234001

GSVIVT01009234001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0000184 (Archaeplastida) Phylogenetic Tree(s): OG0000184_tree ,
OG_05_0003886 (LandPlants) Phylogenetic Tree(s): OG_05_0003886_tree ,
OG_06_0002813 (SeedPlants) Phylogenetic Tree(s): OG_06_0002813_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009234001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00100p00127110 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
AMTR_s00102p00056000 evm_27.TU.AmTr_v1... Nutrient uptake.iron uptake.reduction-based strategy... 0.02 Archaeplastida
AT2G16910 AMS basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
AT3G26744 ATICE1, ICE1, SCRM basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
AT4G21330 DYT1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT4G29930 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 Archaeplastida
AT5G65640 bHLH093 beta HLH protein 93 0.01 Archaeplastida
GSVIVT01004405001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
GSVIVT01008637001 No alias External stimuli response.temperature.ICE-CBF cold... 0.02 Archaeplastida
GSVIVT01013720001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
GSVIVT01013744001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01013745001 No alias Transcription factor bHLH90 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01024008001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
GSVIVT01029311001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.01 Archaeplastida
Gb_05277 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_15579 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_26391 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_36380 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g70310.2 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
LOC_Os02g02820.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
LOC_Os04g23550.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os10g39750.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
MA_10435231g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.01 Archaeplastida
MA_28638g0010 No alias transcription factor (bHLH) 0.01 Archaeplastida
MA_439607g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_63506g0010 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
Mp2g02460.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Mp8g06230.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Pp3c1_20960V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c3_15850V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
Pp3c8_18070V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.01 Archaeplastida
Smo431375 No alias No description available 0.02 Archaeplastida
Solyc02g079810.3.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Solyc04g076845.1.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
Solyc05g005300.2.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Solyc05g014590.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc06g051550.4.1 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.01 Archaeplastida
Solyc07g018010.3.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
Solyc08g062780.2.1 No alias transcription factor (bHLH) 0.01 Archaeplastida
Zm00001e008393_P001 No alias transcription factor (bHLH). iron uptake transcription factor FIT 0.02 Archaeplastida
Zm00001e008463_P008 No alias transcription factor (bHLH) 0.08 Archaeplastida
Zm00001e010525_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e018755_P001 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.01 Archaeplastida
Zm00001e021526_P001 No alias transcription factor (bHLH). transcription factor (ICE1|2) 0.02 Archaeplastida
Zm00001e040186_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e040675_P003 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR011598 bHLH_dom 129 172
No external refs found!