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  5. GSVIVT01009360001

GSVIVT01009360001


Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000724 (Archaeplastida) Phylogenetic Tree(s): OG0000724_tree ,
OG_05_0000483 (LandPlants) Phylogenetic Tree(s): OG_05_0000483_tree ,
OG_06_0000437 (SeedPlants) Phylogenetic Tree(s): OG_06_0000437_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009360001
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AT1G67100 LBD40 LOB domain-containing protein 40 0.04 Archaeplastida
AT1G68510 LBD42 LOB domain-containing protein 42 0.04 Archaeplastida
LOC_Os03g41330.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida
MA_19934g0010 No alias transcription factor (AS2/LOB) 0.04 Archaeplastida
Pp3c16_1150V3.1 No alias LOB domain-containing protein 37 0.02 Archaeplastida
Pp3c18_9980V3.1 No alias LOB domain-containing protein 37 0.02 Archaeplastida
Solyc01g107190.3.1 No alias transcription factor (AS2/LOB) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0006072 glycerol-3-phosphate metabolic process IEP Neighborhood
BP GO:0006808 regulation of nitrogen utilization IEP Neighborhood
MF GO:0008061 chitin binding IEP Neighborhood
MF GO:0008408 3'-5' exonuclease activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
BP GO:0046168 glycerol-3-phosphate catabolic process IEP Neighborhood
BP GO:0052646 alditol phosphate metabolic process IEP Neighborhood
BP GO:1901136 carbohydrate derivative catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004883 LOB 2 101
No external refs found!