1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01009424001

GSVIVT01009424001


Description : RNA biosynthesis.transcriptional activation.MYB superfamily.MYB transcription factor


Gene families : OG0000002 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000116 (LandPlants) Phylogenetic Tree(s): OG_05_0000116_tree ,
OG_06_0000157 (SeedPlants) Phylogenetic Tree(s): OG_06_0000157_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009424001
Cluster HCCA: Cluster_205

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271440 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.05 Archaeplastida
AMTR_s00010p00261750 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.03 Archaeplastida
AMTR_s00024p00224850 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
AT1G63910 MYB103, AtMYB103 myb domain protein 103 0.02 Archaeplastida
AT2G32460 ATMYB101, MYB101, ATM1 myb domain protein 101 0.02 Archaeplastida
AT3G30210 MYB121, ATMYB121 myb domain protein 121 0.04 Archaeplastida
AT3G53200 AtMYB27, MYB27 myb domain protein 27 0.02 Archaeplastida
AT4G13480 AtMYB79, MYB79 myb domain protein 79 0.04 Archaeplastida
AT4G22680 AtMYB85, MYB85 myb domain protein 85 0.02 Archaeplastida
AT4G33450 ATMYB69, MYB69 myb domain protein 69 0.02 Archaeplastida
AT4G34990 MYB32, AtMYB32 myb domain protein 32 0.02 Archaeplastida
GSVIVT01016768001 No alias RNA biosynthesis.transcriptional activation.MYB... 0.04 Archaeplastida
Gb_03400 No alias transcription factor (MYB) 0.04 Archaeplastida
Gb_15606 No alias transcription factor (MYB) 0.03 Archaeplastida
Gb_35820 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os04g43680.1 No alias transcription factor (MYB) 0.02 Archaeplastida
LOC_Os06g46560.1 No alias transcription factor (MYB) 0.03 Archaeplastida
LOC_Os12g03150.1 No alias transcription factor (MYB) 0.02 Archaeplastida
MA_10427849g0010 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_14730g0020 No alias transcription factor (MYB) 0.03 Archaeplastida
MA_7091g0010 No alias transcription factor (MYB) 0.04 Archaeplastida
Mp5g14610.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Pp3c5_2150V3.1 No alias myb domain protein 109 0.03 Archaeplastida
Pp3c7_21220V3.1 No alias myb domain protein 105 0.03 Archaeplastida
Solyc01g111500.3.1 No alias transcription factor (MYB) 0.02 Archaeplastida
Solyc02g092930.1.1 No alias transcription factor (MYB) 0.04 Archaeplastida
Zm00001e004568_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e005044_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e012497_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e012960_P002 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e015235_P001 No alias transcription factor (MYB) 0.02 Archaeplastida
Zm00001e018471_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e030480_P001 No alias transcription factor (MYB) 0.03 Archaeplastida
Zm00001e039756_P002 No alias no hits & (original description: none) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR001005 SANT/Myb 77 118
IPR001005 SANT/Myb 23 68
No external refs found!