1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01009427001

GSVIVT01009427001


Description : Probable carbohydrate esterase At4g34215 OS=Arabidopsis thaliana


Gene families : OG0001666 (Archaeplastida) Phylogenetic Tree(s): OG0001666_tree ,
OG_05_0001566 (LandPlants) Phylogenetic Tree(s): OG_05_0001566_tree ,
OG_06_0001197 (SeedPlants) Phylogenetic Tree(s): OG_06_0001197_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009427001
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g64030.1 No alias Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os03g64050.1 No alias Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.04 Archaeplastida
Solyc01g102330.3.1 No alias Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.03 Archaeplastida
Solyc04g078430.3.1 No alias Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.05 Archaeplastida
Solyc04g078440.4.1 No alias Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.06 Archaeplastida
Solyc07g021510.3.1 No alias Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e033439_P001 No alias Probable carbohydrate esterase At4g34215 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
MF GO:0005048 signal sequence binding IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006621 protein retention in ER lumen IEP Neighborhood
BP GO:0006721 terpenoid metabolic process IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEP Neighborhood
MF GO:0009055 electron transfer activity IEP Neighborhood
BP GO:0016114 terpenoid biosynthetic process IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
MF GO:0016744 transferase activity, transferring aldehyde or ketonic groups IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
BP GO:0032507 maintenance of protein location in cell IEP Neighborhood
MF GO:0033218 amide binding IEP Neighborhood
BP GO:0035437 maintenance of protein localization in endoplasmic reticulum IEP Neighborhood
MF GO:0042277 peptide binding IEP Neighborhood
BP GO:0045185 maintenance of protein location IEP Neighborhood
MF GO:0046923 ER retention sequence binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
BP GO:0051235 maintenance of location IEP Neighborhood
BP GO:0051651 maintenance of location in cell IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0065008 regulation of biological quality IEP Neighborhood
BP GO:0072595 maintenance of protein localization in organelle IEP Neighborhood
InterPro domains Description Start Stop
IPR005181 SASA 1 218
No external refs found!