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  5. GSVIVT01009432001

GSVIVT01009432001


Description : Cell cycle.regulation.cyclins.CYCD-type cyclin


Gene families : OG0000252 (Archaeplastida) Phylogenetic Tree(s): OG0000252_tree ,
OG_05_0007997 (LandPlants) Phylogenetic Tree(s): OG_05_0007997_tree ,
OG_06_0005800 (SeedPlants) Phylogenetic Tree(s): OG_06_0005800_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009432001
Cluster HCCA: Cluster_219

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00074880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
AMTR_s00190p00017930 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclins.CYCD-type cyclin 0.03 Archaeplastida
AT4G34160 CYCD3, CYCD3;1 CYCLIN D3;1 0.05 Archaeplastida
AT5G67260 CYCD3;2 CYCLIN D3;2 0.04 Archaeplastida
GSVIVT01003175001 No alias Cell cycle.regulation.cyclins.CYCD-type cyclin 0.06 Archaeplastida
Gb_02122 No alias cyclin (CYCD) 0.03 Archaeplastida
Gb_03361 No alias cyclin (CYCD) 0.06 Archaeplastida
LOC_Os03g27420.1 No alias cyclin (CYCD) 0.02 Archaeplastida
LOC_Os03g42070.1 No alias cyclin (CYCD) 0.08 Archaeplastida
LOC_Os06g12980.1 No alias cyclin (CYCD) 0.02 Archaeplastida
LOC_Os07g37010.1 No alias cyclin (CYCD) 0.06 Archaeplastida
LOC_Os09g02360.1 No alias cyclin (CYCD) 0.07 Archaeplastida
LOC_Os09g21450.1 No alias cyclin (CYCD) 0.04 Archaeplastida
LOC_Os12g39830.1 No alias cyclin (CYCD) 0.05 Archaeplastida
MA_10429174g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_114375g0010 No alias cyclin (CYCD) 0.05 Archaeplastida
MA_93221g0010 No alias cyclin (CYCD) 0.05 Archaeplastida
Solyc02g092980.3.1 No alias cyclin (CYCD) 0.07 Archaeplastida
Solyc04g078470.3.1 No alias cyclin (CYCD) 0.09 Archaeplastida
Zm00001e000749_P002 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e009441_P003 No alias cyclin (CYCD) 0.05 Archaeplastida
Zm00001e033498_P001 No alias cyclin (CYCD) 0.05 Archaeplastida
Zm00001e034405_P005 No alias cyclin (CYCD) 0.03 Archaeplastida
Zm00001e035215_P001 No alias cyclin (CYCD) 0.07 Archaeplastida
Zm00001e035575_P002 No alias cyclin (CYCD) 0.02 Archaeplastida

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0006284 base-excision repair IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004367 Cyclin_C-dom 200 309
IPR006671 Cyclin_N 79 198
No external refs found!