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  5. GSVIVT01009476001

GSVIVT01009476001


Description : Probable BOI-related E3 ubiquitin-protein ligase 3 OS=Arabidopsis thaliana


Gene families : OG0000354 (Archaeplastida) Phylogenetic Tree(s): OG0000354_tree ,
OG_05_0000233 (LandPlants) Phylogenetic Tree(s): OG_05_0000233_tree ,
OG_06_0009863 (SeedPlants) Phylogenetic Tree(s): OG_06_0009863_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009476001
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AT1G45976 SBP1 S-ribonuclease binding protein 1 0.04 Archaeplastida
Zm00001e037825_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e038522_P001 No alias Probable BOI-related E3 ubiquitin-protein ligase 3... 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006914 autophagy IEP Neighborhood
MF GO:0008134 transcription factor binding IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0017025 TBP-class protein binding IEP Neighborhood
CC GO:0031011 Ino80 complex IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
CC GO:0033202 DNA helicase complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
CC GO:0044422 organelle part IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044446 intracellular organelle part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0061919 process utilizing autophagic mechanism IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
CC GO:0070603 SWI/SNF superfamily-type complex IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
CC GO:0097346 INO80-type complex IEP Neighborhood
CC GO:1904949 ATPase complex IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!