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Description : RNA biosynthesis.transcriptional activation.B3 superfamily.REM transcription factor
Gene families : OG0000741 (Archaeplastida) Phylogenetic Tree(s): OG0000741_tree ,
OG_05_0001199 (LandPlants) Phylogenetic Tree(s): OG_05_0001199_tree ,
OG_06_0001296 (SeedPlants) Phylogenetic Tree(s): OG_06_0001296_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01009519001 | |
| Cluster | HCCA: Cluster_186 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT5G42700 | No alias | AP2/B3-like transcriptional factor family protein | 0.03 | Archaeplastida | |
| AT5G58280 | No alias | AP2/B3-like transcriptional factor family protein | 0.08 | Archaeplastida | |
| Gb_07025 | No alias | transcription factor (REM) | 0.03 | Archaeplastida | |
| Gb_35990 | No alias | transcription factor (REM) | 0.04 | Archaeplastida | |
| LOC_Os03g08620.1 | No alias | transcription factor (REM) | 0.04 | Archaeplastida | |
| MA_10430774g0010 | No alias | No annotation | 0.02 | Archaeplastida | |
| Pp3c1_15410V3.1 | No alias | AP2/B3-like transcriptional factor family protein | 0.03 | Archaeplastida | |
| Pp3c21_16260V3.1 | No alias | AP2/B3-like transcriptional factor family protein | 0.02 | Archaeplastida | |
| Pp3c2_5990V3.1 | No alias | AP2/B3-like transcriptional factor family protein | 0.02 | Archaeplastida | |
| Smo413242 | No alias | No description available | 0.04 | Archaeplastida | |
| Solyc01g108140.4.1 | No alias | transcription factor (REM) | 0.05 | Archaeplastida | |
| Solyc04g079130.2.1 | No alias | transcription factor (REM) | 0.04 | Archaeplastida | |
| Zm00001e000624_P003 | No alias | transcription factor (REM) | 0.11 | Archaeplastida | |
| Zm00001e020584_P001 | No alias | transcription factor (REM) | 0.03 | Archaeplastida | |
| Zm00001e040028_P004 | No alias | transcription factor (REM) | 0.07 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003779 | actin binding | IEP | Neighborhood |
| CC | GO:0005634 | nucleus | IEP | Neighborhood |
| BP | GO:0006275 | regulation of DNA replication | IEP | Neighborhood |
| CC | GO:0043227 | membrane-bounded organelle | IEP | Neighborhood |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | Neighborhood |
| BP | GO:0051052 | regulation of DNA metabolic process | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR003340 | B3_DNA-bd | 113 | 201 |
| No external refs found! |