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  5. GSVIVT01009529001

GSVIVT01009529001


Description : Protein degradation.26S proteasome.regulatory particle.non-ATPase subunits.RPN11 regulatory component


Gene families : OG0003204 (Archaeplastida) Phylogenetic Tree(s): OG0003204_tree ,
OG_05_0003461 (LandPlants) Phylogenetic Tree(s): OG_05_0003461_tree ,
OG_06_0006004 (SeedPlants) Phylogenetic Tree(s): OG_06_0006004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009529001
Cluster HCCA: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
AT5G23540 No alias Mov34/MPN/PAD-1 family protein 0.05 Archaeplastida
Cpa|evm.model.tig00001542.22 No alias Protein degradation.26S proteasome.regulatory... 0.03 Archaeplastida
Cre01.g011500 No alias Protein degradation.26S proteasome.regulatory... 0.06 Archaeplastida
LOC_Os01g16190.1 No alias regulatory component RPN11 of 26S proteasome 0.05 Archaeplastida
LOC_Os05g30800.1 No alias regulatory component RPN11 of 26S proteasome 0.03 Archaeplastida
Pp3c4_8970V3.1 No alias Mov34/MPN/PAD-1 family protein 0.06 Archaeplastida
Solyc04g079200.3.1 No alias regulatory component RPN11 of 26S proteasome 0.07 Archaeplastida
Zm00001e025532_P003 No alias no hits & (original description: none) 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000226 microtubule cytoskeleton organization IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004298 threonine-type endopeptidase activity IEP Neighborhood
CC GO:0005839 proteasome core complex IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
BP GO:0007010 cytoskeleton organization IEP Neighborhood
BP GO:0007017 microtubule-based process IEP Neighborhood
BP GO:0007051 spindle organization IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0031023 microtubule organizing center organization IEP Neighborhood
CC GO:0032991 protein-containing complex IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
BP GO:0051225 spindle assembly IEP Neighborhood
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Neighborhood
MF GO:0070003 threonine-type peptidase activity IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
BP GO:0070925 organelle assembly IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
InterPro domains Description Start Stop
IPR024969 Rpn11/EIF3F_C 167 285
IPR000555 JAMM/MPN+_dom 21 132
No external refs found!