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  5. GSVIVT01009627001

GSVIVT01009627001


Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.RING-domain E3 ligase activities.RING-HCb-type E3 ligase


Gene families : OG0000511 (Archaeplastida) Phylogenetic Tree(s): OG0000511_tree ,
OG_05_0003960 (LandPlants) Phylogenetic Tree(s): OG_05_0003960_tree ,
OG_06_0004443 (SeedPlants) Phylogenetic Tree(s): OG_06_0004443_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009627001
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00059p00171170 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_09093 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Archaeplastida
Mp2g00820.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.02 Archaeplastida
Mp2g15500.1 No alias RBR-Ariadne-class E3 ubiquitin ligase 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0007034 vacuolar transport IEP Neighborhood
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Neighborhood
MF GO:0016866 intramolecular transferase activity IEP Neighborhood
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEP Neighborhood
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Neighborhood
MF GO:0031625 ubiquitin protein ligase binding IEP Neighborhood
MF GO:0044389 ubiquitin-like protein ligase binding IEP Neighborhood
BP GO:0051259 protein complex oligomerization IEP Neighborhood
BP GO:0051260 protein homooligomerization IEP Neighborhood
InterPro domains Description Start Stop
IPR002867 IBR_dom 195 257
IPR002867 IBR_dom 275 315
IPR018957 Znf_C3HC4_RING-type 124 153
No external refs found!