GSVIVT01009628001

Description : Protein biosynthesis.organelle translation machineries.plastidial ribosome.small subunit proteome.psRPS9 component

Gene families : OG0001974 (Archaeplastida) Phylogenetic Tree(s): OG0001974_tree ,
OG_05_0007849 (LandPlants) Phylogenetic Tree(s): OG_05_0007849_tree ,
OG_06_0009917 (SeedPlants) Phylogenetic Tree(s): OG_06_0009917_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01009628001
Cluster	HCCA: Cluster_176

Target	Alias	Description	ECC score	Gene Family Method
AT1G74970	TWN3, RPS9	ribosomal protein S9	0.2	Archaeplastida
Gb_29571	No alias	30S ribosomal protein S9, chloroplastic OS=Arabidopsis...	0.08	Archaeplastida
Gb_39922	No alias	30S ribosomal protein S9, chloroplastic OS=Spinacia...	0.05	Archaeplastida
LOC_Os03g55930.1	No alias	component psRPS9 of small ribosomal subunit proteome	0.13	Archaeplastida
MA_141286g0010	No alias	no hits & (original description: none)	0.06	Archaeplastida
MA_18349g0020	No alias	30S ribosomal protein S9, chloroplastic OS=Spinacia...	0.05	Archaeplastida
Mp3g01740.1	No alias	component psRPS9 of small ribosomal subunit proteome	0.12	Archaeplastida
Pp3c12_1790V3.1	No alias	ribosomal protein S9	0.07	Archaeplastida
Pp3c9_4940V3.1	No alias	ribosomal protein S9	0.06	Archaeplastida
Smo17067	No alias	30S ribosomal protein S9, chloroplastic OS=Spinacia oleracea	0.02	Archaeplastida
Solyc04g079790.3.1	No alias	component psRPS9 of small ribosomal subunit proteome	0.09	Archaeplastida
Zm00001e005809_P002	No alias	component psRPS9 of small ribosomal subunit proteome	0.11	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	cellular amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044267	cellular protein metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044444	cytoplasmic part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended
CC	GO:1990904	ribonucleoprotein complex	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0000413	protein peptidyl-prolyl isomerization	IEP	Neighborhood
MF	GO:0004519	endonuclease activity	IEP	Neighborhood
MF	GO:0004521	endoribonuclease activity	IEP	Neighborhood
MF	GO:0004525	ribonuclease III activity	IEP	Neighborhood
MF	GO:0004540	ribonuclease activity	IEP	Neighborhood
CC	GO:0005622	intracellular	IEP	Neighborhood
MF	GO:0008565	protein transporter activity	IEP	Neighborhood
CC	GO:0009521	photosystem	IEP	Neighborhood
CC	GO:0009522	photosystem I	IEP	Neighborhood
CC	GO:0009538	photosystem I reaction center	IEP	Neighborhood
BP	GO:0010207	photosystem II assembly	IEP	Neighborhood
BP	GO:0015979	photosynthesis	IEP	Neighborhood
MF	GO:0016209	antioxidant activity	IEP	Neighborhood
MF	GO:0016891	endoribonuclease activity, producing 5'-phosphomonoesters	IEP	Neighborhood
MF	GO:0016893	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters	IEP	Neighborhood
BP	GO:0018208	peptidyl-proline modification	IEP	Neighborhood
BP	GO:0019725	cellular homeostasis	IEP	Neighborhood
BP	GO:0022613	ribonucleoprotein complex biogenesis	IEP	Neighborhood
MF	GO:0032296	double-stranded RNA-specific ribonuclease activity	IEP	Neighborhood
BP	GO:0042254	ribosome biogenesis	IEP	Neighborhood
BP	GO:0042592	homeostatic process	IEP	Neighborhood
BP	GO:0044085	cellular component biogenesis	IEP	Neighborhood
CC	GO:0044425	membrane part	IEP	Neighborhood
CC	GO:0044436	thylakoid part	IEP	Neighborhood
BP	GO:0045454	cell redox homeostasis	IEP	Neighborhood
MF	GO:0051920	peroxiredoxin activity	IEP	Neighborhood
BP	GO:0065008	regulation of biological quality	IEP	Neighborhood
CC	GO:0098796	membrane protein complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR000754	Ribosomal_S9	88	209

External Links

No external refs found!

GSVIVT01009628001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation