GSVIVT01009801001

Description : RNA biosynthesis.transcriptional activation.AP2/ERF superfamily.DREB-type transcription factor

Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000734 (SeedPlants) Phylogenetic Tree(s): OG_06_0000734_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01009801001
Cluster	HCCA: Cluster_51

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00006p00266920	evm_27.TU.AmTr_v1...	External stimuli response.biotic...	0.03	Archaeplastida
AMTR_s00039p00088760	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
AT1G01250	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT1G75490	No alias	Integrase-type DNA-binding superfamily protein	0.12	Archaeplastida
AT3G57600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G11590	TINY2	Integrase-type DNA-binding superfamily protein	0.03	Archaeplastida
AT5G44210	ATERF-9, ERF9, ATERF9	erf domain protein 9	0.02	Archaeplastida
AT5G51990	CBF4, DREB1D	C-repeat-binding factor 4	0.03	Archaeplastida
GSVIVT01035852001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
GSVIVT01036228001	No alias	RNA biosynthesis.transcriptional activation.AP2/ERF...	0.04	Archaeplastida
Gb_00745	No alias	transcription factor (DREB)	0.05	Archaeplastida
Gb_37188	No alias	transcription factor (DREB)	0.02	Archaeplastida
Gb_38187	No alias	transcription factor (DREB)	0.04	Archaeplastida
LOC_Os02g10760.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
LOC_Os02g34260.1	No alias	transcription factor (ERF)	0.07	Archaeplastida
LOC_Os02g34270.1	No alias	Ethylene-responsive transcription factor ERF114...	0.07	Archaeplastida
LOC_Os06g07030.1	No alias	transcription factor (DREB)	0.16	Archaeplastida
LOC_Os06g40150.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.02	Archaeplastida
LOC_Os08g45110.1	No alias	transcription factor (DREB)	0.12	Archaeplastida
MA_10434489g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_113446g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_162045g0010	No alias	transcription factor (DREB)	0.05	Archaeplastida
MA_17001g0020	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_214063g0010	No alias	transcription factor (DREB)	0.02	Archaeplastida
MA_3758g0010	No alias	Ethylene-responsive transcription factor ERF013...	0.02	Archaeplastida
MA_411387g0010	No alias	transcription factor (ERF)	0.02	Archaeplastida
MA_484878g0010	No alias	transcription factor (DREB)	0.04	Archaeplastida
MA_647924g0010	No alias	transcription factor (DREB)	0.03	Archaeplastida
MA_7850076g0010	No alias	no hits & (original description: none)	0.02	Archaeplastida
Mp7g09350.1	No alias	transcription factor (ERF)	0.02	Archaeplastida
Pp3c16_17550V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.05	Archaeplastida
Pp3c3_33930V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Pp3c5_880V3.1	No alias	Integrase-type DNA-binding superfamily protein	0.02	Archaeplastida
Solyc01g005630.3.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.03	Archaeplastida
Solyc01g067540.2.1	No alias	transcription factor (ERF)	0.03	Archaeplastida
Solyc02g090790.1.1	No alias	transcription factor (ERF)	0.19	Archaeplastida
Solyc03g095973.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc03g095977.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Solyc03g116610.3.1	No alias	transcription factor (ERF). SHN-type cutin and suberin...	0.03	Archaeplastida
Solyc03g117130.3.1	No alias	transcription factor (ERF)	0.06	Archaeplastida
Solyc04g050750.2.1	No alias	transcription factor (DREB)	0.19	Archaeplastida
Solyc12g056980.1.1	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e003858_P001	No alias	transcription factor (DREB)	0.07	Archaeplastida
Zm00001e007351_P001	No alias	transcription factor (ERF)	0.11	Archaeplastida
Zm00001e015314_P001	No alias	transcription factor (ERF)	0.03	Archaeplastida
Zm00001e015326_P001	No alias	transcription factor (DREB)	0.03	Archaeplastida
Zm00001e020274_P001	No alias	transcription factor (ERF)	0.07	Archaeplastida
Zm00001e023759_P001	No alias	Ethylene-responsive transcription factor ERF017...	0.03	Archaeplastida
Zm00001e031497_P001	No alias	Ethylene-responsive transcription factor ABI4 OS=Oryza...	0.03	Archaeplastida
Zm00001e036401_P001	No alias	transcription factor (DREB)	0.08	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0001101	response to acid chemical	IEP	Neighborhood
BP	GO:0003006	developmental process involved in reproduction	IEP	Neighborhood
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	Neighborhood
BP	GO:0006486	protein glycosylation	IEP	Neighborhood
BP	GO:0007275	multicellular organism development	IEP	Neighborhood
BP	GO:0009415	response to water	IEP	Neighborhood
BP	GO:0009628	response to abiotic stimulus	IEP	Neighborhood
BP	GO:0009790	embryo development	IEP	Neighborhood
BP	GO:0009793	embryo development ending in seed dormancy	IEP	Neighborhood
BP	GO:0010035	response to inorganic substance	IEP	Neighborhood
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Neighborhood
MF	GO:0016763	transferase activity, transferring pentosyl groups	IEP	Neighborhood
BP	GO:0022414	reproductive process	IEP	Neighborhood
BP	GO:0032501	multicellular organismal process	IEP	Neighborhood
BP	GO:0032502	developmental process	IEP	Neighborhood
BP	GO:0043413	macromolecule glycosylation	IEP	Neighborhood
BP	GO:0048856	anatomical structure development	IEP	Neighborhood
MF	GO:0051920	peroxiredoxin activity	IEP	Neighborhood
BP	GO:0070085	glycosylation	IEP	Neighborhood
BP	GO:1901700	response to oxygen-containing compound	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	13	62

External Links

No external refs found!

GSVIVT01009801001

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation