GSVIVT01009860001


Description : RNA biosynthesis.transcriptional activation.C3H zinc finger transcription factor


Gene families : OG0004138 (Archaeplastida) Phylogenetic Tree(s): OG0004138_tree ,
OG_05_0003194 (LandPlants) Phylogenetic Tree(s): OG_05_0003194_tree ,
OG_06_0003763 (SeedPlants) Phylogenetic Tree(s): OG_06_0003763_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009860001
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Zm00001e006646_P001 No alias C3H zinc finger transcription factor 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP Neighborhood
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0005984 disaccharide metabolic process IEP Neighborhood
BP GO:0005991 trehalose metabolic process IEP Neighborhood
BP GO:0005992 trehalose biosynthetic process IEP Neighborhood
BP GO:0009311 oligosaccharide metabolic process IEP Neighborhood
BP GO:0009312 oligosaccharide biosynthetic process IEP Neighborhood
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP Neighborhood
BP GO:0015780 nucleotide-sugar transmembrane transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0031090 organelle membrane IEP Neighborhood
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044431 Golgi apparatus part IEP Neighborhood
BP GO:0046351 disaccharide biosynthetic process IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood
BP GO:0071702 organic substance transport IEP Neighborhood
BP GO:0071705 nitrogen compound transport IEP Neighborhood
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP Neighborhood
CC GO:0098588 bounding membrane of organelle IEP Neighborhood
MF GO:0101005 ubiquitinyl hydrolase activity IEP Neighborhood
BP GO:1901264 carbohydrate derivative transport IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!