AMTR_s00037p00144010 (evm_27.TU.AmTr_v1.0_sc...)

Aliases : evm_27.TU.AmTr_v1.0_scaffold00037.62

Description : RNA biosynthesis.transcriptional activation.NAC transcription factor

Gene families : OG0000008 (Archaeplastida) Phylogenetic Tree(s): OG0000008_tree ,
OG_05_0000015 (LandPlants) Phylogenetic Tree(s): OG_05_0000015_tree ,
OG_06_0000234 (SeedPlants) Phylogenetic Tree(s): OG_06_0000234_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: AMTR_s00037p00144010
Cluster	HCCA: Cluster_18

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00044p00058470	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.05	Archaeplastida
AMTR_s00099p00131560	evm_27.TU.AmTr_v1...	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
AT1G12260	EMB2749,...	NAC 007	0.03	Archaeplastida
AT1G52880	ANAC018, NAM,...	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT1G52890	ANAC019, NAC019	NAC domain containing protein 19	0.03	Archaeplastida
AT1G54330	ANAC020, NAC020	NAC domain containing protein 20	0.06	Archaeplastida
AT1G62700	VND5, ANAC026	Arabidopsis NAC domain containing protein 26	0.03	Archaeplastida
AT1G71930	ANAC030, VND7	vascular related NAC-domain protein 7	0.03	Archaeplastida
AT1G79580	SMB, ANAC033	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT2G24430	ANAC039, NAC038, ANAC038	NAC domain containing protein 38	0.02	Archaeplastida
AT2G43000	NAC042, anac042	NAC domain containing protein 42	0.02	Archaeplastida
AT2G46770	NST1, ANAC043, EMB2301	NAC (No Apical Meristem) domain transcriptional...	0.03	Archaeplastida
AT3G03200	anac045, NAC045	NAC domain containing protein 45	0.02	Archaeplastida
AT3G04060	anac046, NAC046	NAC domain containing protein 46	0.02	Archaeplastida
AT3G04070	anac047, NAC047	NAC domain containing protein 47	0.04	Archaeplastida
AT3G17730	anac057, NAC057	NAC domain containing protein 57	0.02	Archaeplastida
AT3G49530	ANAC062, NAC062, NTL6	NAC domain containing protein 62	0.03	Archaeplastida
AT3G61910	NST2, NAC066, ANAC066	NAC domain protein 66	0.02	Archaeplastida
AT4G10350	ANAC070, BRN2, NAC070	NAC domain containing protein 70	0.03	Archaeplastida
AT4G36160	VND2, NAC076, ANAC076	NAC domain containing protein 76	0.03	Archaeplastida
AT5G13180	VNI2, NAC083, ANAC083	NAC domain containing protein 83	0.02	Archaeplastida
AT5G17260	NAC086, anac086	NAC domain containing protein 86	0.04	Archaeplastida
AT5G62380	NAC101, VND6, ANAC101	NAC-domain protein 101	0.03	Archaeplastida
GSVIVT01008291001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01008601001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01029392001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
GSVIVT01035214001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.04	Archaeplastida
GSVIVT01035554001	No alias	RNA biosynthesis.transcriptional activation.NAC...	0.02	Archaeplastida
Gb_01375	No alias	transcription factor (NAC)	0.03	Archaeplastida
Gb_05670	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_07132	No alias	transcription factor (NAC)	0.02	Archaeplastida
Gb_37720	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os01g01470.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
LOC_Os01g29840.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os02g56600.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os07g48550.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os08g02300.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
LOC_Os09g24560.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
LOC_Os09g32260.2	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_10426704g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_123846g0010	No alias	transcription factor (NAC)	0.04	Archaeplastida
MA_138461g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_167321g0010	No alias	transcription factor (NAC)	0.03	Archaeplastida
MA_18939g0010	No alias	no hits & (original description: none)	0.03	Archaeplastida
MA_33912g0010	No alias	transcription factor (NAC)	0.02	Archaeplastida
MA_6777g0010	No alias	No annotation	0.03	Archaeplastida
Mp4g22890.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Mp6g02620.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Mp6g20920.1	No alias	transcription factor (NAC)	0.03	Archaeplastida
Pp3c13_20650V3.1	No alias	NAC 007	0.02	Archaeplastida
Pp3c16_23260V3.1	No alias	NAC domain containing protein 35	0.02	Archaeplastida
Pp3c27_7430V3.1	No alias	NAC (No Apical Meristem) domain transcriptional...	0.02	Archaeplastida
Pp3c5_740V3.1	No alias	NAC domain containing protein 25	0.03	Archaeplastida
Pp3c6_1310V3.1	No alias	NAC domain containing protein 70	0.03	Archaeplastida
Pp3c8_6080V3.1	No alias	NAC domain containing protein 2	0.02	Archaeplastida
Solyc01g102740.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc02g036430.2.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc02g084350.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc02g088180.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc03g080090.4.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc05g007550.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc06g063430.2.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Solyc06g069710.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc08g079120.3.1	No alias	transcription factor (NAC)	0.04	Archaeplastida
Solyc12g017400.3.1	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e000198_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e007411_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e007905_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida
Zm00001e008026_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e009234_P001	No alias	transcription factor (NAC)	0.03	Archaeplastida
Zm00001e023019_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e030150_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e034914_P001	No alias	transcription factor (NAC)	0.05	Archaeplastida
Zm00001e036720_P002	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e038258_P001	No alias	transcription factor (NAC)	0.02	Archaeplastida
Zm00001e039031_P001	No alias	transcription factor (NAC)	0.04	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003755	peptidyl-prolyl cis-trans isomerase activity	IEP	Neighborhood
BP	GO:0006508	proteolysis	IEP	Neighborhood
MF	GO:0008233	peptidase activity	IEP	Neighborhood
MF	GO:0008234	cysteine-type peptidase activity	IEP	Neighborhood
MF	GO:0016859	cis-trans isomerase activity	IEP	Neighborhood
MF	GO:0070011	peptidase activity, acting on L-amino acid peptides	IEP	Neighborhood
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR003441	NAC-dom	6	133

External Links

No external refs found!

AMTR_s00037p00144010 (evm_27.TU.AmTr_v1.0_sc...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation