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  5. GSVIVT01009880001

GSVIVT01009880001


Description : Phytohormones.cytokinin.synthesis.cytokinin phosphoribohydrolase


Gene families : OG0000412 (Archaeplastida) Phylogenetic Tree(s): OG0000412_tree ,
OG_05_0000386 (LandPlants) Phylogenetic Tree(s): OG_05_0000386_tree ,
OG_06_0000278 (SeedPlants) Phylogenetic Tree(s): OG_06_0000278_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01009880001
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AT2G28305 LOG1, ATLOG1 Putative lysine decarboxylase family protein 0.03 Archaeplastida
AT3G53450 No alias Putative lysine decarboxylase family protein 0.02 Archaeplastida
AT5G06300 No alias Putative lysine decarboxylase family protein 0.03 Archaeplastida
AT5G11950 No alias Putative lysine decarboxylase family protein 0.03 Archaeplastida
Gb_18237 No alias cytokinin phosphoribohydrolase 0.07 Archaeplastida
Gb_18238 No alias Cytokinin riboside 5-monophosphate phosphoribohydrolase... 0.03 Archaeplastida
Gb_24266 No alias cytokinin phosphoribohydrolase 0.04 Archaeplastida
Gb_32702 No alias cytokinin phosphoribohydrolase 0.06 Archaeplastida
LOC_Os03g01880.1 No alias cytokinin phosphoribohydrolase 0.03 Archaeplastida
LOC_Os03g64070.1 No alias cytokinin phosphoribohydrolase 0.04 Archaeplastida
LOC_Os04g43840.1 No alias cytokinin phosphoribohydrolase 0.04 Archaeplastida
LOC_Os09g37540.1 No alias cytokinin phosphoribohydrolase 0.03 Archaeplastida
MA_925g0020 No alias cytokinin phosphoribohydrolase 0.03 Archaeplastida
Solyc01g007263.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e005344_P001 No alias cytokinin phosphoribohydrolase 0.02 Archaeplastida
Zm00001e012673_P001 No alias cytokinin phosphoribohydrolase 0.03 Archaeplastida
Zm00001e020007_P001 No alias cytokinin phosphoribohydrolase 0.04 Archaeplastida
Zm00001e032278_P001 No alias cytokinin phosphoribohydrolase 0.03 Archaeplastida
Zm00001e041245_P001 No alias cytokinin phosphoribohydrolase 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004860 protein kinase inhibitor activity IEP Neighborhood
MF GO:0004861 cyclin-dependent protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0004888 transmembrane signaling receptor activity IEP Neighborhood
MF GO:0004970 ionotropic glutamate receptor activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005216 ion channel activity IEP Neighborhood
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0007050 cell cycle arrest IEP Neighborhood
MF GO:0008066 glutamate receptor activity IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0015276 ligand-gated ion channel activity IEP Neighborhood
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEP Neighborhood
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0019207 kinase regulator activity IEP Neighborhood
MF GO:0019210 kinase inhibitor activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0019887 protein kinase regulator activity IEP Neighborhood
BP GO:0022402 cell cycle process IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood
MF GO:0022824 transmitter-gated ion channel activity IEP Neighborhood
MF GO:0022834 ligand-gated channel activity IEP Neighborhood
MF GO:0022835 transmitter-gated channel activity IEP Neighborhood
MF GO:0022836 gated channel activity IEP Neighborhood
MF GO:0022838 substrate-specific channel activity IEP Neighborhood
MF GO:0022839 ion gated channel activity IEP Neighborhood
MF GO:0030234 enzyme regulator activity IEP Neighborhood
MF GO:0030291 protein serine/threonine kinase inhibitor activity IEP Neighborhood
MF GO:0030594 neurotransmitter receptor activity IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0038023 signaling receptor activity IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
MF GO:0060089 molecular transducer activity IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0098772 molecular function regulator IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR031100 LOG_fam 54 183
No external refs found!